myRT

myRT report for GCA_000703885.1_ASM70388v1

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Seq: JNPU01000001.1 (429740 bp)
Overview 1 RT 1: 23148-29179 bp Neighborhood of RT #1 [23148, 29316] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 23148-23288 bp Ori: KDW85097.1 Feature: domain Description: SfsB Location: 23157-23229 bp Feature: domain Description: SfsB Location: 231 57-23229 bp Feature: gene Location: 23285-23755 bp Feature: gene Location: 24102-27311 bp Ori: KDW85099.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24630-25119 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24630-251 1 9 bp Feature: domain Description: nitrilase Location: 26625-27222 bp Feature: domain Description: nitrilase Location: 26625-27222 bp Feature: gene Location: 27627-28409 bp Ori: KDW85100.1 Feature: domain Description: AbiEi_3_N Location: 27639-27900 bp Feature: domain Description: AbiEi_3_N Location: 27639-27900 bp Feature: domain Description: AbiEi_3 Location: 27912-28368 bp Feature: domain Description: AbiEi_3 Location: 2791 2-28368 bp Feature: gene Location: 28396-29316 bp Ori: KDW85101.1 Feature: domain Description: AbiEii Location: 28438-29179 bp Feature: domain Description: AbiEii Location: 28438-291 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: JNPU01000052.1 (17843 bp)
Overview 1 RT 1: 8644-12027 bp Neighborhood of RT #1 [8644, 12092] RVT-GII GIIM PHA02517 Feature: gene Location: 8644-8901 bp Feature: gene Location: 9223-9357 bp Feature: gene Location: 9552-11060 bp Ori: KDW75493.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9810-10542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9810-10542 bp Feature: domain Description: GIIM Note: maturase Location: 10617-10815 bp Feature: domain Description: GIIM Note: maturase Location: 10617-10815 bp Feature: gene Location: 11099-11221 bp Feature: gene Location: 11667-12092 bp Ori: KDW75495.1 Feature: domain Description: PHA02517 Location: 11691-12027 bp Feature: domain Description: PHA02 517 Location: 11691-12 02 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JNPU01000036.1 (40099 bp)
Overview 1 RT 1: 13652-18868 bp Neighborhood of RT #1 [13652, 19050] PinE RVT-GII GIIM PRK09413 lnt Feature: gene Location: 13652-14209 bp Ori: KDW78545.1 Gene: tnpR Feature: domain Description: PinE Location: 13655-14204 bp Feature: domain Description: PinE Location: 13 655-14204 bp Feature: gene Location: 14309-14710 bp Feature: gene Location: 14919-16271 bp Ori: KDW78547.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15240-15858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15240-15858 bp Feature: domain Description: GIIM Note: maturase Location: 15906-16137 bp Feature: domain Description: GIIM Note: maturase Location: 15906-1613 7 bp Feature: gene Location: 16747-16944 bp Ori: KDW78548.1 Feature: domain Description: PRK09413 Location: 16750-16912 bp Feature: domain Description: PRK09413 Location: 16750-16912 bp Feature: gene Location: 17839-19050 bp Ori: KDW78549.1 Feature: domain Description: lnt Location: 18142-18868 bp Feature: domain Description: lnt Location: 18142-18868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, GIIM (pfam08388), PRK09413 (IS2 repressor TnpA; Reviewed), lnt (TIGR00546)