myRT

myRT report for GCA_000704305.1_ASM70430v1

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Seq: JNQS01000033.1 (41601 bp)
Overview 1 RT 1: 1-5403 bp Neighborhood of RT #1 [1, 5403] YhhI YhhI YhhI YhhI RVT-GII GIIM YhhI YhhI YhhI Feature: gene Location: 1-943 bp Ori: KDY08619.1 Feature: domain Description: YhhI Location: 4-367 bp Feature: domain Description: YhhI Location: 4-367 bp Feature: domain Description: YhhI Location: 424-778 bp Feature: domain Description: YhhI Location: 424-778 bp Feature: domain Description: YhhI Location: 778-943 bp Feature: domain Description: YhhI Location: 778-943 bp Feature: gene Location: 1119-1307 bp Ori: KDY08620.1 Feature: domain Description: YhhI Location: 1122-1293 bp Feature: domain Description: YhhI Location: 1 1 22-1 293 bp Feature: gene Location: 1390-2640 bp Ori: KDY08621.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1594-2251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 594-2251 bp Feature: domain Description: GIIM Note: maturase Location: 2332-2554 bp Feature: domain Description: GIIM Note: maturase Location: 2332-2554 bp Feature: gene Location: 3172-4071 bp Ori: KDY08622.1 Feature: domain Description: YhhI Location: 3178-3463 bp Feature: domain Description: YhhI Location: 31 78-3463 bp Feature: domain Description: YhhI Location: 3520-3874 bp Feature: domain Description: YhhI Location: 3520-3874 bp Feature: domain Description: YhhI Location: 3874-4054 bp Feature: domain Description: YhhI Location: 3874-4054 bp Feature: gene Location: 4441-5403 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388)

Seq: JNQS01000034.1 (39748 bp)
Overview 1 RT 1: 17944-24620 bp Neighborhood of RT #1 [17944, 24655] PRK09678 RVT-UG8 RVT-UG3 PRK09692 proA Feature: gene Location: 17944-18216 bp Ori: KDY08587.1 Feature: domain Description: PRK09678 Location: 17953-18121 bp Feature: domain Description: PRK09678 Location: 17953-1812 1 bp Feature: gene Location: 18395-18517 bp Feature: gene Location: 18665-20668 bp Ori: KDY08589.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 19160-19607 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 19160-19607 bp Feature: gene Location: 20672-21868 bp Ori: KDY08590.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 20957-21419 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2 0957-2 1419 bp Feature: gene Location: 21870-23048 bp Ori: KDY08591.1 Feature: domain Description: PRK09692 Location: 21876-23034 bp Feature: domain Description: PRK09692 Location: 2 1876-2 3034 bp Feature: gene Location: 23402-24655 bp Ori: KDY08592.1 Gene: proA Feature: domain Description: proA Location: 23429-24620 bp Feature: domain Description: proA Location: 2 342 9-2 462 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG8, RVT-UG3, PRK09692 (Integrase; provisional), proA (TIGR00407)