myRT

myRT report for GCA_000704325.1_ASM70432v1

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Seq: JNQT01000137.1 (3063 bp)
Overview 1 RT 1: 63-3019 bp Neighborhood of RT #1 [63, 3021] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 63-344 bp Feature: domain Description: PHA02517 Location: 66-279 bp Feature: domain Description: PHA0251 7 Location: 66-279 bp Feature: gene Location: 950-2458 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1208-1940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 208-1 940 bp Feature: domain Description: GIIM Note: maturase Location: 2015-2213 bp Feature: domain Description: GIIM Note: maturase Location: 201 5-221 3 bp Feature: gene Location: 2575-3021 bp Feature: domain Description: PHA02517 Location: 2578-3019 bp Feature: domain Description: PHA0251 7 Location: 2578-301 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JNQT01000004.1 (188774 bp)
Overview 1 RT 1: 37885-44085 bp Neighborhood of RT #1 [37885, 44093] int Phage_Cox RVT-Retrons ABC_ATPase Q Feature: gene Location: 37885-38880 bp Feature: domain Description: int Location: 37888-38857 bp Feature: domain Description: int Location: 37888-38857 bp Feature: gene Location: 39390-40574 bp Feature: domain Description: Phage_Cox Location: 39468-39636 bp Feature: domain Description: Phage_Cox Location: 39468-39636 bp Feature: gene Location: 40901-41890 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41018-41579 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41018-41579 bp Feature: gene Location: 41892-43244 bp Feature: domain Description: ABC_ATPase Location: 41952-42675 bp Feature: domain Description: ABC_ATPase Location: 41952 -42 675 bp Feature: gene Location: 43575-44093 bp Feature: domain Description: Q Location: 43725-44085 bp Feature: domain Description: Q Location: 4372 5-44085 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT int (PHA02601), Phage_Cox (pfam10743), RVT-Retrons, ABC_ATPase (pfam09818), Q (PHA02536)