myRT

myRT report for GCA_000704525.1_ASM70452v1

Download annotations/find similar RTs

Seq: JNRE01000006.1 (206306 bp)
Overview 1 RT 1: 158921-163521 bp 2 RT 2: 173308-177136 bp Neighborhood of RT #1 [158921, 163526] RVT-GII RVT-GII GIIM LacI PBP1_GntR Neighborhood of RT #2 [173308, 177136] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 158921-159124 bp Feature: gene Location: 159475-159801 bp Feature: gene Location: 160710-161144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160902-161118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 60902-1 61 1 1 8 bp Feature: gene Location: 161273-161968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 161276-161528 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 61 276-1 61 528 bp Feature: domain Description: GIIM Note: maturase Location: 161576-161798 bp Feature: domain Description: GIIM Note: maturase Location: 1 61 576-1 61 798 bp Feature: gene Location: 162276-162413 bp Feature: gene Location: 162495-163526 bp Feature: domain Description: LacI Location: 162537-162672 bp Feature: domain Description: LacI Location: 1 62537-1 62672 bp Feature: domain Description: PBP1_GntR Location: 162711-163521 bp Feature: domain Description: PBP1 _GntR Location: 1 6271 1 -1 63521 bp Feature: gene Location: 173308-173634 bp Feature: domain Description: InsE Location: 173311-173632 bp Feature: domain Description: InsE Location: 1 7331 1 -1 73632 bp Feature: gene Location: 173634-174113 bp Feature: domain Description: PHA02517 Location: 173694-174048 bp Feature: domain Description: PHA0251 7 Location: 1 73694-1 74048 bp Feature: gene Location: 174720-176228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 174978-175710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 74978-1 7571 0 bp Feature: domain Description: GIIM Note: maturase Location: 175785-175983 bp Feature: domain Description: GIIM Note: maturase Location: 1 75785-1 75983 bp Feature: gene Location: 176381-176557 bp Feature: domain Description: PHA02517 Location: 176384-176486 bp Feature: domain Description: PHA0251 7 Location: 1 76384-1 76486 bp Feature: gene Location: 176993-177136 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), LacI (pfam00356), PBP1_GntR (cd01575), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JNRE01000055.1 (14992 bp)
Overview 1 RT 1: 15-2930 bp Neighborhood of RT #1 [15, 2950] DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII group_II_RT_mat PRK15224 Feature: gene Location: 15-380 bp Feature: domain Description: DDE_Tnp_IS66 Location: 36-192 bp Feature: domain Description: DDE_Tnp_IS66 Location: 36-192 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 246-357 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2 46-357 bp Feature: gene Location: 414-893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 420-831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 0-831 bp Feature: gene Location: 1155-1373 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1272-1365 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 12 72 -1365 bp Feature: gene Location: 2201-2950 bp Feature: domain Description: PRK15224 Location: 2246-2930 bp Feature: domain Description: PRK152 2 4 Location: 2 2 46-2 930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), PRK15224 (pili assembly chaperone PapD), RVT-GII