myRT

myRT report for GCA_000704545.1_ASM70454v1

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Seq: JNRF01000023.1 (84761 bp)
Overview 1 RT 1: 2094-5596 bp Neighborhood of RT #1 [2094, 5596] PHA02517 RVT-GII GIIM Feature: gene Location: 2094-2573 bp Feature: domain Description: PHA02517 Location: 2154-2508 bp Feature: domain Description: PHA0251 7 Location: 21 54-2508 bp Feature: gene Location: 2870-2983 bp Feature: gene Location: 3180-4688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3438-4170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3438-41 70 bp Feature: domain Description: GIIM Note: maturase Location: 4245-4443 bp Feature: domain Description: GIIM Note: maturase Location: 4245-4443 bp Feature: gene Location: 4883-5017 bp Feature: gene Location: 5453-5596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JNRF01000008.1 (173562 bp)
Overview 1 RT 1: 158988-163588 bp Neighborhood of RT #1 [158988, 163593] RVT-GII RVT-GII GIIM LacI PBP1_GntR Feature: gene Location: 158988-159191 bp Feature: gene Location: 159542-159868 bp Feature: gene Location: 160777-161211 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160969-161185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160969-161185 bp Feature: gene Location: 161265-162035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 161268-161595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1612 68-161595 bp Feature: domain Description: GIIM Note: maturase Location: 161643-161865 bp Feature: domain Description: GIIM Note: maturase Location: 161643-161865 bp Feature: gene Location: 162343-162480 bp Feature: gene Location: 162562-163593 bp Feature: domain Description: LacI Location: 162604-162739 bp Feature: domain Description: LacI Location: 162 604-162 739 bp Feature: domain Description: PBP1_GntR Location: 162778-163588 bp Feature: domain Description: PBP1_GntR Location: 162 778-163588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), LacI (pfam00356), PBP1_GntR (cd01575)

Seq: JNRF01000069.1 (8625 bp)
Overview 1 RT 1: 5678-8590 bp Neighborhood of RT #1 [5678, 8613] PRK15224 group_II_RT_mat RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 5678-6427 bp Feature: domain Description: PRK15224 Location: 5723-6407 bp Feature: domain Description: PRK15224 Location: 5723 -6407 bp Feature: gene Location: 7255-7473 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 7372-7465 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 73 72-7465 bp Feature: gene Location: 7735-8214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7741-8152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7741-8152 bp Feature: gene Location: 8248-8613 bp Feature: domain Description: DDE_Tnp_IS66 Location: 8269-8425 bp Feature: domain Description: DDE_Tnp_IS66 Location: 8269-8425 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 8479-8590 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 8479-8590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15224 (pili assembly chaperone PapD), group_II_RT_mat (TIGR04416), RVT-GII, DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)