myRT

myRT report for GCA_000704605.1_ASM70460v1

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Seq: JNRI01000074.1 (15405 bp)
Overview 1 RT 1: 341-2617 bp 2 RT 2: 12638-14841 bp Neighborhood of RT #1 [341, 2652] RVT-GII GIIM PHA02517 DDE_Tnp_IS66 Neighborhood of RT #2 [12638, 15065] Tra5 PHA02517 RVT-GII GIIM Feature: gene Location: 341-1174 bp Ori: KDY87183.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-656 bp Feature: domain Description: GIIM Note: maturase Location: 731-950 bp Feature: domain Description: GIIM Note: maturase Location: 731 -950 bp Feature: gene Location: 1291-1737 bp Ori: KDY87184.1 Feature: domain Description: PHA02517 Location: 1294-1735 bp Feature: domain Description: PHA0251 7 Location: 1 294-1 735 bp Feature: gene Location: 1777-2652 bp Ori: KDY87185.1 Feature: domain Description: DDE_Tnp_IS66 Location: 1780-2617 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 780-261 7 bp Feature: gene Location: 12638-13624 bp Ori: KDY87197.1 Feature: domain Description: Tra5 Location: 12863-13364 bp Feature: domain Description: Tra5 Location: 1 2863-1 3364 bp Feature: gene Location: 13669-14115 bp Ori: KDY87198.1 Feature: domain Description: PHA02517 Location: 13672-14113 bp Feature: domain Description: PHA0251 7 Location: 1 3672-1 41 1 3 bp Feature: gene Location: 14232-15065 bp Ori: KDY87199.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14238-14547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4238-1 4547 bp Feature: domain Description: GIIM Note: maturase Location: 14622-14841 bp Feature: domain Description: GIIM Note: maturase Location: 1 4622-1 4841 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), DDE_Tnp_IS66 (pfam03050), Tra5 (COG2801)

Seq: JNRI01000093.1 (10899 bp)
Overview 1 RT 1: 8164-10335 bp Neighborhood of RT #1 [8164, 10559] RepB-RCR_reg PHA02517 RVT-GII GIIM Feature: gene Location: 8164-8424 bp Ori: KDY85545.1 Feature: domain Description: RepB-RCR_reg Location: 8167-8401 bp Feature: domain Description: RepB-RCR_reg Location: 8167-8401 bp Feature: gene Location: 9163-9609 bp Ori: KDY85546.1 Feature: domain Description: PHA02517 Location: 9166-9607 bp Feature: domain Description: PHA02 517 Location: 9166-9607 bp Feature: gene Location: 9726-10559 bp Ori: KDY85547.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9732-10041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9732 -10041 bp Feature: domain Description: GIIM Note: maturase Location: 10116-10335 bp Feature: domain Description: GIIM Note: maturase Location: 10116-10335 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RepB-RCR_reg (pfam10723), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JNRI01000161.1 (2930 bp)
Overview 1 RT 1: 1-2930 bp Neighborhood of RT #1 [1, 2930] PHA02517 RVT-GII GIIM Feature: gene Location: 1-160 bp Ori: KDY83328.1 Feature: domain Description: PHA02517 Location: 4-160 bp Feature: domain Description: PHA02517 Location: 4-160 bp Feature: gene Location: 277-1110 bp Ori: KDY83329.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 283-592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 283 -592 bp Feature: domain Description: GIIM Note: maturase Location: 667-886 bp Feature: domain Description: GIIM Note: maturase Location: 667-886 bp Feature: gene Location: 1832-2930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JNRI01000154.1 (3161 bp)
Overview 1 RT 1: 63-2597 bp Neighborhood of RT #1 [63, 2821] HTH_38 Tra8 PHA02517 RVT-GII GIIM Feature: gene Location: 63-1214 bp Ori: KDY83450.1 Feature: domain Description: HTH_38 Location: 72-186 bp Feature: domain Description: HTH_38 Location: 72-186 bp Feature: domain Description: Tra8 Location: 222-1203 bp Feature: domain Description: Tra8 Location: 222-1203 bp Feature: gene Location: 1425-1871 bp Ori: KDY83451.1 Feature: domain Description: PHA02517 Location: 1428-1869 bp Feature: domain Description: PHA02517 Location: 14 28-1869 bp Feature: gene Location: 1988-2821 bp Ori: KDY83452.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1994-2303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1994 -2303 bp Feature: domain Description: GIIM Note: maturase Location: 2378-2597 bp Feature: domain Description: GIIM Note: maturase Location: 2378-2597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JNRI01000184.1 (2145 bp)
Overview 1 RT 1: 341-2109 bp Neighborhood of RT #1 [341, 2132] RVT-GII GIIM PHA02517 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 341-1174 bp Ori: KDY83029.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-65 6 bp Feature: domain Description: GIIM Note: maturase Location: 731-950 bp Feature: domain Description: GIIM Note: maturase Location: 731-95 0 bp Feature: gene Location: 1291-1737 bp Ori: KDY83030.1 Feature: domain Description: PHA02517 Location: 1294-1735 bp Feature: domain Description: PHA025 17 Location: 1294-1735 bp Feature: gene Location: 1785-2132 bp Ori: KDY83031.1 Feature: domain Description: DDE_Tnp_IS66 Location: 1794-1977 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1794-1977 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1998-2109 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1998-2109 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)

Seq: JNRI01000089.1 (11337 bp)
Overview 1 RT 1: 9125-10773 bp Neighborhood of RT #1 [9125, 10997] PHA02517 RVT-GII GIIM Feature: gene Location: 9125-9322 bp Feature: gene Location: 9601-10047 bp Ori: KDY85855.1 Feature: domain Description: PHA02517 Location: 9604-10045 bp Feature: domain Description: PHA02517 Location: 96 04-10045 bp Feature: gene Location: 10164-10997 bp Ori: KDY85856.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10170-10479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10170-10479 bp Feature: domain Description: GIIM Note: maturase Location: 10554-10773 bp Feature: domain Description: GIIM Note: maturase Location: 10554-10773 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JNRI01000131.1 (4359 bp)
Overview 1 RT 1: 341-2110 bp Neighborhood of RT #1 [341, 2110] RVT-GII GIIM PHA02517 Feature: gene Location: 341-1174 bp Ori: KDY83914.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347 -656 bp Feature: domain Description: GIIM Note: maturase Location: 731-950 bp Feature: domain Description: GIIM Note: maturase Location: 7 31-950 bp Feature: gene Location: 1291-1737 bp Ori: KDY83915.1 Feature: domain Description: PHA02517 Location: 1294-1735 bp Feature: domain Description: PHA02517 Location: 1294-17 35 bp Feature: gene Location: 1931-2110 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JNRI01000087.1 (11795 bp)
Overview 1 RT 1: 1779-4897 bp Neighborhood of RT #1 [1779, 4932] COG4584 RVT-GII GIIM InsE DDE_Tnp_IS1 Feature: gene Location: 1779-2420 bp Ori: KDY86087.1 Feature: domain Description: COG4584 Location: 1788-2088 bp Feature: domain Description: COG458 4 Location: 178 8 -208 8 bp Feature: gene Location: 2466-2603 bp Feature: gene Location: 2625-3956 bp Ori: KDY86089.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2955-3573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2955-3573 bp Feature: domain Description: GIIM Note: maturase Location: 3621-3852 bp Feature: domain Description: GIIM Note: maturase Location: 3621-38 52 bp Feature: gene Location: 4364-4504 bp Ori: KDY86090.1 Feature: domain Description: InsE Location: 4385-4499 bp Feature: domain Description: InsE Location: 438 5-4499 bp Feature: gene Location: 4690-4932 bp Ori: KDY86091.1 Feature: domain Description: DDE_Tnp_IS1 Location: 4696-4897 bp Feature: domain Description: DDE_Tnp_IS1 Location: 4696-48 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), RVT-GII, GIIM (pfam08388), InsE (COG2963), DDE_Tnp_IS1 (pfam03400)

Seq: JNRI01000113.1 (6573 bp)
Overview 1 RT 1: 3659-6009 bp Neighborhood of RT #1 [3659, 6233] PHA02518 PHA02517 RVT-GII GIIM Feature: gene Location: 3659-4291 bp Ori: KDY84484.1 Feature: domain Description: PHA02518 Location: 3671-4262 bp Feature: domain Description: PHA02518 Location: 3671-4262 bp Feature: gene Location: 4837-5283 bp Ori: KDY84485.1 Feature: domain Description: PHA02517 Location: 4840-5281 bp Feature: domain Description: PHA02517 Location: 4840-5281 bp Feature: gene Location: 5400-6233 bp Ori: KDY84486.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5406-5715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5406-5715 bp Feature: domain Description: GIIM Note: maturase Location: 5790-6009 bp Feature: domain Description: GIIM Note: maturase Location: 579 0-6009 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02518 (ParA-like protein; Provisional), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JNRI01000156.1 (3102 bp)
Overview 1 RT 1: 341-1894 bp Neighborhood of RT #1 [341, 1894] RVT-GII GIIM PHA02517 Feature: gene Location: 341-1174 bp Ori: KDY83421.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-656 bp Feature: domain Description: GIIM Note: maturase Location: 731-950 bp Feature: domain Description: GIIM Note: maturase Location: 731-950 bp Feature: gene Location: 1291-1737 bp Ori: KDY83422.1 Feature: domain Description: PHA02517 Location: 1294-1735 bp Feature: domain Description: PHA02517 Location: 1294-1735 bp Feature: gene Location: 1721-1894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JNRI01000132.1 (4276 bp)
Overview 1 RT 1: 2331-3712 bp Neighborhood of RT #1 [2331, 3936] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 2331-2537 bp Ori: KDY83893.1 Feature: domain Description: InsE Location: 2355-2499 bp Feature: domain Description: InsE Location: 2355-2499 bp Feature: gene Location: 2540-2986 bp Ori: KDY83894.1 Feature: domain Description: PHA02517 Location: 2543-2984 bp Feature: domain Description: PHA02517 Location: 2543-2984 bp Feature: gene Location: 3103-3936 bp Ori: KDY83895.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3109-3418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3109-3418 bp Feature: domain Description: GIIM Note: maturase Location: 3493-3712 bp Feature: domain Description: GIIM Note: maturase Location: 3493-3712 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JNRI01000139.1 (3805 bp)
Overview 1 RT 1: 341-2194 bp Neighborhood of RT #1 [341, 2217] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 341-1174 bp Ori: KDY83744.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347-656 bp Feature: domain Description: GIIM Note: maturase Location: 731-950 bp Feature: domain Description: GIIM Note: maturase Location: 731-950 bp Feature: gene Location: 1291-1737 bp Ori: KDY83745.1 Feature: domain Description: PHA02517 Location: 1294-1735 bp Feature: domain Description: PHA02517 Location: 12 94-1735 bp Feature: gene Location: 1825-2217 bp Ori: KDY83746.1 Feature: domain Description: InsE Location: 1846-2194 bp Feature: domain Description: InsE Location: 1846-2194 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)