myRT

myRT report for GCA_000704745.1_ASM70474v1

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Seq: JNRP01000027.1 (48728 bp)
Overview 1 RT 1: 1450-10162 bp Neighborhood of RT #1 [1450, 10164] PAAR_2 RhsA RHS_repeat RhsA RhsA RVT-GII GIIM YhhI YhhI PRK01271 Feature: gene Location: 1450-5670 bp Feature: domain Description: PAAR_2 Location: 1456-1537 bp Feature: domain Description: PAAR_2 Location: 1 456-1 537 bp Feature: domain Description: RhsA Location: 2038-2482 bp Feature: domain Description: RhsA Location: 2038-2482 bp Feature: domain Description: RHS_repeat Location: 2545-2635 bp Feature: domain Description: RHS_repeat Location: 2545-2635 bp Feature: domain Description: RhsA Location: 2704-3040 bp Feature: domain Description: RhsA Location: 2704-3040 bp Feature: domain Description: RhsA Location: 3067-5236 bp Feature: domain Description: RhsA Location: 3067-5236 bp Feature: gene Location: 6714-7058 bp Feature: gene Location: 7689-8906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7860-8517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7860-851 7 bp Feature: domain Description: GIIM Note: maturase Location: 8601-8811 bp Feature: domain Description: GIIM Note: maturase Location: 8601 -881 1 bp Feature: gene Location: 9113-9904 bp Feature: domain Description: YhhI Location: 9116-9479 bp Feature: domain Description: YhhI Location: 91 1 6-9479 bp Feature: domain Description: YhhI Location: 9536-9887 bp Feature: domain Description: YhhI Location: 9536-9887 bp Feature: gene Location: 9937-10164 bp Feature: domain Description: PRK01271 Location: 9940-10162 bp Feature: domain Description: PRK01 271 Location: 9940-1 01 62 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAAR_2 (cd14738), RhsA (COG3209), RHS_repeat (pfam05593), RVT-GII, GIIM (pfam08388), YhhI (COG5433), PRK01271 (tautomerase PptA)

Seq: JNRP01000023.1 (63382 bp)
Overview 1 RT 1: 423-2890 bp Neighborhood of RT #1 [423, 2949] RVT-GII GIIM PHA02517 COG3436 Feature: gene Location: 423-1931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 681-1413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 681-1413 bp Feature: domain Description: GIIM Note: maturase Location: 1488-1686 bp Feature: domain Description: GIIM Note: maturase Location: 1488-1686 bp Feature: gene Location: 2123-2494 bp Feature: domain Description: PHA02517 Location: 2126-2492 bp Feature: domain Description: PHA02 517 Location: 2 12 6-2 492 bp Feature: gene Location: 2620-2949 bp Feature: domain Description: COG3436 Location: 2623-2890 bp Feature: domain Description: COG3436 Location: 2 62 3-2 890 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), COG3436 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: JNRP01000054.1 (11772 bp)
Overview 1 RT 1: 117-2984 bp Neighborhood of RT #1 [117, 2986] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 117-1625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375-1107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 75-1107 bp Feature: domain Description: GIIM Note: maturase Location: 1182-1380 bp Feature: domain Description: GIIM Note: maturase Location: 1182-13 80 bp Feature: gene Location: 2232-2711 bp Feature: domain Description: PHA02517 Location: 2292-2646 bp Feature: domain Description: PHA02517 Location: 2292-2646 bp Feature: gene Location: 2711-2986 bp Feature: domain Description: InsE Location: 2753-2984 bp Feature: domain Description: InsE Location: 2753 -2984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: JNRP01000053.1 (14759 bp)
Overview 1 RT 1: 504-5823 bp Neighborhood of RT #1 [504, 5823] PtsN LacI PBP1_GntR RVT-GII GIIM RVT-GII Feature: gene Location: 504-947 bp Feature: domain Description: PtsN Location: 507-942 bp Feature: domain Description: PtsN Location: 507-94 2 bp Feature: gene Location: 1218-2249 bp Feature: domain Description: LacI Location: 1260-1395 bp Feature: domain Description: LacI Location: 1260-1395 bp Feature: domain Description: PBP1_GntR Location: 1434-2244 bp Feature: domain Description: PBP1_GntR Location: 14 34 -224 4 bp Feature: gene Location: 2776-3582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2779-3142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2779-314 2 bp Feature: domain Description: GIIM Note: maturase Location: 3190-3412 bp Feature: domain Description: GIIM Note: maturase Location: 3190-34 12 bp Feature: gene Location: 3600-4034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3792-4008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3792-4 008 bp Feature: gene Location: 4943-5269 bp Feature: gene Location: 5479-5823 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacI (pfam00356), PBP1_GntR (cd01575), RVT-GII, GIIM (pfam08388), PtsN (COG1762)

Seq: JNRP01000046.1 (21898 bp)
Overview 1 RT 1: 117-2709 bp Neighborhood of RT #1 [117, 2711] RVT-GII GIIM PHA02517 PHA02517 Feature: gene Location: 117-1625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375-1107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375 -1107 bp Feature: domain Description: GIIM Note: maturase Location: 1182-1380 bp Feature: domain Description: GIIM Note: maturase Location: 1182-1380 bp Feature: gene Location: 2232-2444 bp Feature: domain Description: PHA02517 Location: 2235-2379 bp Feature: domain Description: PHA025 17 Location: 2235 -2379 bp Feature: gene Location: 2499-2711 bp Feature: domain Description: PHA02517 Location: 2559-2709 bp Feature: domain Description: PHA025 17 Location: 25 5 9-2709 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JNRP01000093.1 (1573 bp)
Overview 1 RT 1: 1-1573 bp Neighborhood of RT #1 [1, 1573] RVT-GII GIIM PHA02517 Feature: gene Location: 1-1062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16-544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16 -544 bp Feature: domain Description: GIIM Note: maturase Location: 619-817 bp Feature: domain Description: GIIM Note: maturase Location: 6 19-817 bp Feature: gene Location: 1240-1573 bp Feature: domain Description: PHA02517 Location: 1243-1573 bp Feature: domain Description: PHA02517 Location: 1243-1573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)