myRT

myRT report for GCA_000704785.1_ASM70478v1

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Seq: JNRR01000043.1 (35415 bp)
Overview 1 RT 1: 5347-8073 bp Neighborhood of RT #1 [5347, 8073] RVT-GII GIIM PHA02517 Feature: gene Location: 5347-5460 bp Feature: gene Location: 5496-5618 bp Feature: gene Location: 5657-7165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5915-6647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 591 5-6647 bp Feature: domain Description: GIIM Note: maturase Location: 6722-6920 bp Feature: domain Description: GIIM Note: maturase Location: 6722-6920 bp Feature: gene Location: 7318-7494 bp Feature: domain Description: PHA02517 Location: 7321-7423 bp Feature: domain Description: PHA0251 7 Location: 7321 -7423 bp Feature: gene Location: 7930-8073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JNRR01000065.1 (13947 bp)
Overview 1 RT 1: 10190-13588 bp Neighborhood of RT #1 [10190, 13590] PRK15224 group_II_RT_mat RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66_C DDE_Tnp_IS66 Feature: gene Location: 10190-10939 bp Feature: domain Description: PRK15224 Location: 10235-10919 bp Feature: domain Description: PRK152 2 4 Location: 102 35-10919 bp Feature: gene Location: 11767-11985 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 11884-11977 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 11884-11977 bp Feature: gene Location: 12247-12726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12253-12664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 2 53-12 664 bp Feature: gene Location: 12760-13125 bp Feature: domain Description: DDE_Tnp_IS66 Location: 12781-12937 bp Feature: domain Description: DDE_Tnp_IS66 Location: 12 781-12 937 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 12991-13102 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 12 991-13102 bp Feature: gene Location: 13138-13590 bp Feature: domain Description: DDE_Tnp_IS66 Location: 13141-13588 bp Feature: domain Description: DDE_Tnp_IS66 Location: 13141-13588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15224 (pili assembly chaperone PapD), group_II_RT_mat (TIGR04416), RVT-GII, DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)

Seq: JNRR01000010.1 (160246 bp)
Overview 1 RT 1: 7573-12178 bp Neighborhood of RT #1 [7573, 12178] LacI PBP1_GntR RVT-GII GIIM RVT-GII Feature: gene Location: 7573-8604 bp Feature: domain Description: LacI Location: 7615-7750 bp Feature: domain Description: LacI Location: 7615-7750 bp Feature: domain Description: PBP1_GntR Location: 7789-8599 bp Feature: domain Description: PBP1_GntR Location: 7789-8599 bp Feature: gene Location: 8686-8823 bp Feature: gene Location: 9131-9937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9134-9497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913 4-9497 bp Feature: domain Description: GIIM Note: maturase Location: 9545-9767 bp Feature: domain Description: GIIM Note: maturase Location: 9545-9767 bp Feature: gene Location: 9955-10389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10147-10363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10147-103 63 bp Feature: gene Location: 11298-11624 bp Feature: gene Location: 11975-12178 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacI (pfam00356), PBP1_GntR (cd01575), RVT-GII, GIIM (pfam08388)