myRT

myRT report for GCA_000704805.1_ASM70480v1

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Seq: JNRS01000047.1 (14620 bp)
Overview 1 RT 1: 5317-11448 bp Neighborhood of RT #1 [5317, 11448] lnt PRK09413 RVT-GII GIIM PinE Feature: gene Location: 5317-6528 bp Feature: domain Description: lnt Location: 5620-6346 bp Feature: domain Description: lnt Location: 5620-6346 bp Feature: gene Location: 7423-7620 bp Feature: domain Description: PRK09413 Location: 7426-7588 bp Feature: domain Description: PRK0941 3 Location: 7426-7588 bp Feature: gene Location: 8096-9448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8417-9035 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 841 7-9035 bp Feature: domain Description: GIIM Note: maturase Location: 9083-9314 bp Feature: domain Description: GIIM Note: maturase Location: 9083-931 4 bp Feature: gene Location: 10158-10715 bp Feature: domain Description: PinE Location: 10161-10710 bp Feature: domain Description: PinE Location: 1 01 61 -1 071 0 bp Feature: gene Location: 11293-11448 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), lnt (TIGR00546), PRK09413 (IS2 repressor TnpA; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JNRS01000045.1 (15484 bp)
Overview 1 RT 1: 10670-15482 bp Neighborhood of RT #1 [10670, 15484] fecE RVT-GII GIIM PHA02517 InsE Feature: gene Location: 10670-11281 bp Feature: domain Description: fecE Location: 10673-11279 bp Feature: domain Description: fecE Location: 10673-112 79 bp Feature: gene Location: 11839-12096 bp Feature: gene Location: 12747-14255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13005-13737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13005-13737 bp Feature: domain Description: GIIM Note: maturase Location: 13812-14010 bp Feature: domain Description: GIIM Note: maturase Location: 13812 -14010 bp Feature: gene Location: 14862-15341 bp Feature: domain Description: PHA02517 Location: 14922-15276 bp Feature: domain Description: PHA02 517 Location: 1492 2 -152 76 bp Feature: gene Location: 15341-15484 bp Feature: domain Description: InsE Location: 15356-15482 bp Feature: domain Description: InsE Location: 15356-15482 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fecE (PRK11231), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)