myRT

myRT report for GCA_000704825.1_ASM70482v1

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Seq: JNRT01000039.1 (31185 bp)
Overview 1 RT 1: 15581-20329 bp Neighborhood of RT #1 [15581, 20409] PHA02517 RVT-GII GIIM fecE Feature: gene Location: 15581-16060 bp Feature: domain Description: PHA02517 Location: 15641-15995 bp Feature: domain Description: PHA0251 7 Location: 1 5641 -1 5995 bp Feature: gene Location: 16357-16470 bp Feature: gene Location: 16667-18175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16925-17657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6925-1 7657 bp Feature: domain Description: GIIM Note: maturase Location: 17732-17930 bp Feature: domain Description: GIIM Note: maturase Location: 1 7732-1 7930 bp Feature: gene Location: 18940-19083 bp Feature: gene Location: 19603-20409 bp Feature: domain Description: fecE Location: 19606-20329 bp Feature: domain Description: fecE Location: 1 9606-20329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), fecE (PRK11231)

Seq: JNRT01000053.1 (14664 bp)
Overview 1 RT 1: 5349-11480 bp Neighborhood of RT #1 [5349, 11480] lnt PRK09413 RVT-GII GIIM PinE Feature: gene Location: 5349-6560 bp Feature: domain Description: lnt Location: 5652-6378 bp Feature: domain Description: lnt Location: 5652 -6378 bp Feature: gene Location: 7455-7652 bp Feature: domain Description: PRK09413 Location: 7458-7620 bp Feature: domain Description: PRK09413 Location: 7458-762 0 bp Feature: gene Location: 8128-9480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8449-9067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8449-9067 bp Feature: domain Description: GIIM Note: maturase Location: 9115-9346 bp Feature: domain Description: GIIM Note: maturase Location: 9115-9346 bp Feature: gene Location: 10190-10747 bp Feature: domain Description: PinE Location: 10193-10742 bp Feature: domain Description: PinE Location: 10193-10742 bp Feature: gene Location: 11325-11480 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), lnt (TIGR00546), PRK09413 (IS2 repressor TnpA; Reviewed), RVT-GII, GIIM (pfam08388)