myRT

myRT report for GCA_000704965.1_ASM70496v1

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Seq: JNRZ01000146.1 (2793 bp)
Overview 1 RT 1: 512-2023 bp Neighborhood of RT #1 [512, 2247] HTH_32 PHA02517 RVT-GII GIIM Feature: gene Location: 512-811 bp Ori: KDZ74488.1 Feature: domain Description: HTH_32 Location: 581-794 bp Feature: domain Description: HTH_32 Location: 581 -794 bp Feature: gene Location: 851-1297 bp Ori: KDZ74489.1 Feature: domain Description: PHA02517 Location: 854-1295 bp Feature: domain Description: PHA0251 7 Location: 854-1 295 bp Feature: gene Location: 1414-2247 bp Ori: KDZ74490.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1420-1729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 420-1 729 bp Feature: domain Description: GIIM Note: maturase Location: 1804-2023 bp Feature: domain Description: GIIM Note: maturase Location: 1 804-2023 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JNRZ01000130.1 (3295 bp)
Overview 1 RT 1: 10-3052 bp Neighborhood of RT #1 [10, 3123] PHA02517 RVT-GII GIIM InsG Feature: gene Location: 10-456 bp Ori: KDZ75648.1 Feature: domain Description: PHA02517 Location: 13-454 bp Feature: domain Description: PHA02 517 Location: 13-454 bp Feature: gene Location: 573-1406 bp Ori: KDZ75649.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 579-888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 579-888 bp Feature: domain Description: GIIM Note: maturase Location: 963-1182 bp Feature: domain Description: GIIM Note: maturase Location: 963-1182 bp Feature: gene Location: 2011-3123 bp Ori: KDZ75650.1 Feature: domain Description: InsG Location: 2014-3052 bp Feature: domain Description: InsG Location: 2 014-3052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsG (COG3385)

Seq: JNRZ01000121.1 (4556 bp)
Overview 1 RT 1: 1-4545 bp Neighborhood of RT #1 [1, 4547] COG3436 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM PHA02517 Feature: gene Location: 1-138 bp Ori: KDZ76245.1 Feature: domain Description: COG3436 Location: 4-136 bp Feature: domain Description: COG3 43 6 Location: 4-13 6 bp Feature: gene Location: 169-1782 bp Ori: KDZ76246.1 Feature: domain Description: LZ_Tnp_IS66 Location: 349-559 bp Feature: domain Description: LZ_Tnp_IS66 Location: 3 49-559 bp Feature: domain Description: zf-IS66 Location: 583-715 bp Feature: domain Description: zf-IS66 Location: 583 -715 bp Feature: domain Description: DDE_Tnp_IS66 Location: 760-1627 bp Feature: domain Description: DDE_Tnp_IS66 Location: 760-1627 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1651-1759 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1651-1759 bp Feature: gene Location: 2476-3984 bp Ori: KDZ76247.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2734-3466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273 4-3 466 bp Feature: domain Description: GIIM Note: maturase Location: 3541-3739 bp Feature: domain Description: GIIM Note: maturase Location: 3 541-3 73 9 bp Feature: gene Location: 4101-4547 bp Ori: KDZ76248.1 Feature: domain Description: PHA02517 Location: 4104-4545 bp Feature: domain Description: PHA02517 Location: 4104-4545 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3436 (Transposase ), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JNRZ01000109.1 (6628 bp)
Overview 1 RT 1: 547-2329 bp Neighborhood of RT #1 [547, 2329] RVT-GII GIIM PHA02517 Feature: gene Location: 547-1380 bp Ori: KDZ77189.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553-862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 553-862 bp Feature: domain Description: GIIM Note: maturase Location: 937-1156 bp Feature: domain Description: GIIM Note: maturase Location: 937-1156 bp Feature: gene Location: 1497-1943 bp Ori: KDZ77190.1 Feature: domain Description: PHA02517 Location: 1500-1941 bp Feature: domain Description: PHA02517 Location: 1500-194 1 bp Feature: gene Location: 2195-2329 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JNRZ01000131.1 (3276 bp)
Overview 1 RT 1: 10-3170 bp Neighborhood of RT #1 [10, 3241] PHA02517 RVT-GII GIIM InsG Feature: gene Location: 10-456 bp Ori: KDZ75636.1 Feature: domain Description: PHA02517 Location: 13-454 bp Feature: domain Description: PHA025 17 Location: 13-45 4 bp Feature: gene Location: 573-1406 bp Ori: KDZ75637.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 579-888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 79-888 bp Feature: domain Description: GIIM Note: maturase Location: 963-1182 bp Feature: domain Description: GIIM Note: maturase Location: 963-1182 bp Feature: gene Location: 2129-3241 bp Ori: KDZ75638.1 Feature: domain Description: InsG Location: 2132-3170 bp Feature: domain Description: InsG Location: 2132-3170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsG (COG3385)