myRT

myRT report for GCA_000705195.1_RH_uta_asm_3_0324

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Seq: JGZY01000003.1 (159274 bp)
Overview 1 RT 1: 71688-81994 bp 2 RT 2: 98252-107090 bp Neighborhood of RT #1 [71688, 81996] COG3177 RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Neighborhood of RT #2 [98252, 107119] PRK10770 LptD RVT_N RVT-GII YkfC HNH COG3178 NTP_transferase_like_1 Feature: gene Location: 71688-72809 bp Feature: domain Description: COG3177 Location: 71706-72798 bp Feature: domain Description: COG31 77 Location: 71 706-72798 bp Feature: gene Location: 73068-73205 bp Feature: gene Location: 73533-75218 bp Feature: RT Description: RVT_N Location: 73590-73830 bp Feature: RT Description: RVT_N Location: 73590-73830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73878-74514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73878-7451 4 bp Feature: domain Description: GIIM Note: maturase Location: 74568-74799 bp Feature: domain Description: GIIM Note: maturase Location: 74568-74799 bp Feature: domain Description: HNH Note: nucleases Location: 75051-75189 bp Feature: domain Description: HNH Note: nucleases Location: 75051 -751 89 bp Feature: gene Location: 76299-80036 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76407-77064 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 76407-77064 bp Feature: domain Description: PRK09776 Location: 77277-77748 bp Feature: domain Description: PRK09776 Location: 77277-77748 bp Feature: domain Description: PAS Location: 77805-78330 bp Feature: domain Description: PAS Location: 77805-78330 bp Feature: domain Description: PRK10060 Location: 78339-79986 bp Feature: domain Description: PRK1 0060 Location: 78339-79986 bp Feature: gene Location: 80143-81996 bp Feature: domain Description: PRK05658 Location: 80155-81994 bp Feature: domain Description: PRK05658 Location: 801 55-81 994 bp Feature: gene Location: 98252-99544 bp Feature: domain Description: PRK10770 Location: 98342-99536 bp Feature: domain Description: PRK1 0770 Location: 98342-99536 bp Feature: gene Location: 99525-102314 bp Feature: domain Description: LptD Location: 99720-102300 bp Feature: domain Description: LptD Location: 99720-1 02300 bp Feature: gene Location: 102447-104159 bp Feature: RT Description: RVT_N Location: 102504-102747 bp Feature: RT Description: RVT_N Location: 1 02504-1 02747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102792-103428 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 02792-1 03428 bp Feature: domain Description: YkfC Location: 103635-103788 bp Feature: domain Description: YkfC Location: 1 03635-1 03788 bp Feature: domain Description: HNH Note: nucleases Location: 103965-104103 bp Feature: domain Description: HNH Note: nucleases Location: 1 03965-1 041 03 bp Feature: gene Location: 105432-106448 bp Feature: domain Description: COG3178 Location: 105435-106434 bp Feature: domain Description: COG31 78 Location: 1 05435-1 06434 bp Feature: gene Location: 106445-107119 bp Feature: domain Description: NTP_transferase_like_1 Location: 106451-107090 bp Feature: domain Description: NTP_transferase_like_1 Location: 1 06451 -1 07090 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: JGZY01000010.1 (6728 bp)
Overview 1 RT 1: 220-3685 bp Neighborhood of RT #1 [220, 3720] RVT_N RVT-GII YkfC HNHc UDP_G4E_4_SDR_e GT4_CapM-like Feature: gene Location: 220-1926 bp Feature: RT Description: RVT_N Location: 277-520 bp Feature: RT Description: RVT_N Location: 2 77-52 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 565-1201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 565-12 01 bp Feature: domain Description: YkfC Location: 1399-1504 bp Feature: domain Description: YkfC Location: 1399-1504 bp Feature: domain Description: HNHc Note: nucleases Location: 1714-1870 bp Feature: domain Description: HNHc Note: nucleases Location: 1714-1870 bp Feature: gene Location: 1970-2449 bp Feature: domain Description: UDP_G4E_4_SDR_e Location: 2012-2423 bp Feature: domain Description: UDP_G4E_4_SDR_e Location: 2 012 -2 42 3 bp Feature: gene Location: 2590-3720 bp Feature: domain Description: GT4_CapM-like Location: 2605-3685 bp Feature: domain Description: GT4_CapM-like Location: 2 605-3685 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: JGZY01000463.1 (4055 bp)
Overview 1 RT 1: 1979-3686 bp Neighborhood of RT #1 [1979, 3686] RVT-GII McrA Feature: gene Location: 1979-2299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1988-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1988-2180 bp Feature: gene Location: 2492-2869 bp Feature: domain Description: McrA Location: 2696-2807 bp Feature: domain Description: McrA Location: 2696-2807 bp Feature: gene Location: 3234-3686 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: JGZY01000460.1 (5916 bp)
Overview 1 RT 1: 1477-4664 bp Neighborhood of RT #1 [1477, 4720] PRK02106 PRK02106 RVT_N RVT-GII YkfC HNHc Feature: gene Location: 1477-2055 bp Feature: domain Description: PRK02106 Location: 1480-2047 bp Feature: domain Description: PRK02106 Location: 14 80-204 7 bp Feature: gene Location: 2064-2390 bp Feature: domain Description: PRK02106 Location: 2070-2373 bp Feature: domain Description: PRK02106 Location: 2070-2373 bp Feature: gene Location: 3014-4720 bp Feature: RT Description: RVT_N Location: 3071-3314 bp Feature: RT Description: RVT_N Location: 3071-3314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3359-3995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3359-3995 bp Feature: domain Description: YkfC Location: 4193-4298 bp Feature: domain Description: YkfC Location: 4 193-4 298 bp Feature: domain Description: HNHc Note: nucleases Location: 4508-4664 bp Feature: domain Description: HNHc Note: nucleases Location: 4 508-4 664 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: JGZY01000461.1 (9922 bp)
Overview 1 RT 1: 696-4138 bp Neighborhood of RT #1 [696, 4191] RVT-GII MFS_ShiA_like Feature: gene Location: 696-1091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 699-1020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 699-1020 bp Feature: gene Location: 2875-4191 bp Feature: domain Description: MFS_ShiA_like Location: 2944-4138 bp Feature: domain Description: MFS_ShiA_like Location: 2944-4138 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: JGZY01000459.1 (253199 bp)
Overview 1 RT 1: 252572-253031 bp Neighborhood of RT #1 [252572, 253042] RVT-GII GIIM Feature: gene Location: 252572-253042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 252581-252773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 252581-252773 bp Feature: domain Description: GIIM Note: maturase Location: 252824-253031 bp Feature: domain Description: GIIM Note: maturase Location: 252824-253031 bp Sorry, your browser does not support inline SVG.
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