myRT

myRT report for GCA_000705535.1_BukCp6.0

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Seq: JJOA01000007.1 Burkholderia cenocepacia strain 869T2 contig_15, whole genome shotgun sequence (99319 bp)
Overview 1 RT 1: 61197-65944 bp Neighborhood of RT #1 [61197, 65955] LCAD CaiD RVT-GII RVT-GII COG3547 SphA Feature: gene Location: 61197-62360 bp Feature: domain Description: LCAD Location: 61254-62358 bp Feature: domain Description: LCAD Location: 61 254-62358 bp Feature: gene Location: 62382-63215 bp Feature: domain Description: CaiD Location: 62388-63204 bp Feature: domain Description: CaiD Location: 62388-63204 bp Feature: gene Location: 63326-63643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63332-63425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63332-63425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63434-63524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63434-63524 bp Feature: gene Location: 64610-64819 bp Feature: domain Description: COG3547 Location: 64616-64790 bp Feature: domain Description: COG3547 Location: 6461 6-64790 bp Feature: gene Location: 65038-65955 bp Feature: domain Description: SphA Location: 65047-65944 bp Feature: domain Description: SphA Location: 65047-65944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LCAD (cd01160), CaiD (COG1024), RVT-GII, COG3547 (Transposase ), SphA (COG4313)

Seq: JJOA01000076.1 Burkholderia cenocepacia strain 869T2 contig_8, whole genome shotgun sequence (347130 bp)
Overview 1 RT 1: 275338-280919 bp Neighborhood of RT #1 [275338, 280954] MFS_MucK Histone_HNS RVT-Retrons FIN dTDP_HR_like_SDR_e Feature: gene Location: 275338-276585 bp Feature: domain Description: MFS_MucK Location: 275428-276562 bp Feature: domain Description: MFS_MucK Location: 2 7542 8-2 76562 bp Feature: gene Location: 276858-277187 bp Feature: domain Description: Histone_HNS Location: 276879-277116 bp Feature: domain Description: Histone_HNS Location: 2 76879-2 77116 bp Feature: gene Location: 277501-278850 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 277966-278602 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 77966-2 78602 bp Feature: gene Location: 279149-279721 bp Feature: domain Description: FIN Location: 279326-279686 bp Feature: domain Description: FIN Location: 2 7932 6-2 79686 bp Feature: gene Location: 279989-280954 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 280028-280919 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 2 8002 8-2 80919 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), dTDP_HR_like_SDR_e (cd05254)