myRT

myRT report for GCA_000706605.1_Kleb_pneu_BIDMC_10_V2

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Seq: KL407322.1 Klebsiella pneumoniae BIDMC 10 genomic scaffold adjHa-supercont2.2, whole genome shotgun sequence (2335088 bp)
Overview 1 RT 1: 582793-586200 bp 2 RT 2: 1034411-1040016 bp 3 RT 3: 1377095-1382513 bp Neighborhood of RT #1 [582793, 586301] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1034411, 1040042] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1377095, 1382515] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 582793-583524 bp Feature: domain Description: Laminin_G_3 Location: 583114-583468 bp Feature: domain Description: Laminin_G_3 Location: 5831 1 4-583468 bp Feature: gene Location: 583521-583730 bp Feature: gene Location: 584183-585667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584585-585275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584585-585275 bp Feature: gene Location: 585745-585984 bp Feature: gene Location: 585984-586301 bp Feature: domain Description: PRK10276 Location: 585990-586104 bp Feature: domain Description: PRK1 0276 Location: 585990-5861 04 bp Feature: domain Description: PRK10276 Location: 586131-586200 bp Feature: domain Description: PRK1 0276 Location: 5861 31 -586200 bp Feature: gene Location: 1034411-1034974 bp Feature: domain Description: YbjK Location: 1034417-1034954 bp Feature: domain Description: YbjK Location: 1 03441 7-1 034954 bp Feature: gene Location: 1035097-1036149 bp Feature: domain Description: int Location: 1035100-1036099 bp Feature: domain Description: int Location: 1 0351 00-1 036099 bp Feature: gene Location: 1036568-1038052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1036970-1037660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 036970-1 037660 bp Feature: gene Location: 1038151-1039095 bp Feature: gene Location: 1039107-1040042 bp Feature: domain Description: Phage_CI_repr Location: 1039191-1039374 bp Feature: domain Description: Phage_CI_repr Location: 1 0391 91 -1 039374 bp Feature: domain Description: Phage_CI_repr Location: 1039503-1039695 bp Feature: domain Description: Phage_CI_repr Location: 1 039503-1 039695 bp Feature: domain Description: Phage_CI_C Location: 1039722-1040016 bp Feature: domain Description: Phage_CI_C Location: 1 039722-1 04001 6 bp Feature: gene Location: 1377095-1378234 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1377278-1378178 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 377278-1 3781 78 bp Feature: gene Location: 1378405-1378647 bp Feature: domain Description: DinI Location: 1378456-1378636 bp Feature: domain Description: DinI Location: 1 378456-1 378636 bp Feature: gene Location: 1379265-1380749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1379667-1380357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 379667-1 380357 bp Feature: gene Location: 1380828-1381247 bp Feature: domain Description: PRK10276 Location: 1380831-1381242 bp Feature: domain Description: PRK1 0276 Location: 1 380831 -1 381 242 bp Feature: gene Location: 1381250-1382515 bp Feature: domain Description: umuC Location: 1381253-1382513 bp Feature: domain Description: umuC Location: 1 381 253-1 38251 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KL407321.1 Klebsiella pneumoniae BIDMC 10 genomic scaffold adjHa-supercont2.1, whole genome shotgun sequence (2862795 bp)
Overview 1 RT 1: 308253-314736 bp Neighborhood of RT #1 [308253, 314738] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 308253-309311 bp Feature: domain Description: YccC Location: 308259-309297 bp Feature: domain Description: YccC Location: 3082 59-3092 97 bp Feature: gene Location: 309410-309883 bp Feature: domain Description: PRK10016 Location: 309413-309872 bp Feature: domain Description: PRK10016 Location: 309413-309872 bp Feature: gene Location: 309965-311449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 310367-311057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 310367-311057 bp Feature: gene Location: 311970-313133 bp Feature: domain Description: dacD Location: 311973-313128 bp Feature: domain Description: dacD Location: 311973-31312 8 bp Feature: gene Location: 313314-314738 bp Feature: domain Description: SbcB Location: 313320-314736 bp Feature: domain Description: SbcB Location: 31332 0-314736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KL407323.1 Klebsiella pneumoniae BIDMC 10 genomic scaffold adjHa-supercont2.3, whole genome shotgun sequence (212356 bp)
Overview 1 RT 1: 82303-87297 bp Neighborhood of RT #1 [82303, 87299] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 82303-83574 bp Feature: domain Description: umuC Location: 82306-83569 bp Feature: domain Description: umuC Location: 823 06-83 569 bp Feature: gene Location: 83574-83999 bp Feature: domain Description: PRK10276 Location: 83577-83985 bp Feature: domain Description: PRK10276 Location: 83 577-83 985 bp Feature: gene Location: 84405-85889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84807-85497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84807-85497 bp Feature: gene Location: 86123-86353 bp Feature: gene Location: 86874-87299 bp Feature: domain Description: Antirestrict Location: 87009-87297 bp Feature: domain Description: Antirestrict Location: 87009-87297 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)