myRT

myRT report for GCA_000707005.2_ASM70700v2

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Seq: JNSX02000011.1 Vibrio parahaemolyticus strain CFSAN007440 VP34_11, whole genome shotgun sequence (521817 bp)
Overview 1 RT 1: 338085-343165 bp Neighborhood of RT #1 [338085, 343263] Mrr_cat zf-C4_Topoisom RVT-Retrons HipA_So_like couple_hipB Feature: gene Location: 338085-338900 bp Ori: OQU12931.1 Feature: domain Description: Mrr_cat Location: 338385-338715 bp Feature: domain Description: Mrr_cat Location: 338385-33871 5 bp Feature: domain Description: zf-C4_Topoisom Location: 338784-338892 bp Feature: domain Description: zf-C4_Topoisom Location: 338784-338892 bp Feature: gene Location: 339525-340331 bp Feature: gene Location: 340454-341437 bp Ori: OQU12932.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 340619-341174 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 34061 9-341 1 74 bp Feature: gene Location: 341529-342950 bp Ori: OQU12933.1 Feature: domain Description: HipA_So_like Location: 341625-342906 bp Feature: domain Description: HipA_So_like Location: 341 625-342906 bp Feature: gene Location: 342928-343263 bp Ori: OQU12934.1 Feature: domain Description: couple_hipB Location: 342997-343165 bp Feature: domain Description: couple_hipB Location: 342997-3431 65 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mrr_cat (pfam04471), zf-C4_Topoisom (pfam01396), RVT-Retrons, HipA_So_like (cd17809), couple_hipB (TIGR03070)

Seq: JNSX02000022.1 Vibrio parahaemolyticus strain CFSAN007440 VP34_22, whole genome shotgun sequence (395750 bp)
Overview 1 RT 1: 38021-46590 bp Neighborhood of RT #1 [38021, 46694] RVT-UG5 nitrilase ANK Feature: gene Location: 38021-38500 bp Feature: gene Location: 38500-39618 bp Feature: gene Location: 40174-43113 bp Ori: OQU09582.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 40669-41140 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 40669-41140 bp Feature: domain Description: nitrilase Location: 42454-43039 bp Feature: domain Description: nitrilase Location: 42 454-43039 bp Feature: gene Location: 43146-43622 bp Feature: gene Location: 44010-46694 bp Ori: OQU09289.1 Feature: domain Description: ANK Location: 46242-46590 bp Feature: domain Description: ANK Location: 462 42 -46590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424), ANK (smart00248)