myRT

myRT report for GCA_000707025.2_ASM70702v2

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Seq: JNSW02000005.1 Vibrio parahaemolyticus strain CFSAN007439 VP4_5, whole genome shotgun sequence (521427 bp)
Overview 1 RT 1: 338086-343166 bp Neighborhood of RT #1 [338086, 343264] Mrr_cat zf-C4_Topoisom RVT-Retrons HipA_So_like couple_hipB Feature: gene Location: 338086-338901 bp Ori: OQU09915.1 Feature: domain Description: Mrr_cat Location: 338386-338716 bp Feature: domain Description: Mrr_cat Location: 338386-33871 6 bp Feature: domain Description: zf-C4_Topoisom Location: 338785-338893 bp Feature: domain Description: zf-C4_Topoisom Location: 338785-338893 bp Feature: gene Location: 339526-340332 bp Feature: gene Location: 340455-341438 bp Ori: OQU09916.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 340620-341175 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 340620-341 1 75 bp Feature: gene Location: 341530-342951 bp Ori: OQU09917.1 Feature: domain Description: HipA_So_like Location: 341626-342907 bp Feature: domain Description: HipA_So_like Location: 341 626-342907 bp Feature: gene Location: 342929-343264 bp Ori: OQU09918.1 Feature: domain Description: couple_hipB Location: 342998-343166 bp Feature: domain Description: couple_hipB Location: 342998-3431 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mrr_cat (pfam04471), zf-C4_Topoisom (pfam01396), RVT-Retrons, HipA_So_like (cd17809), couple_hipB (TIGR03070)

Seq: JNSW02000004.1 Vibrio parahaemolyticus strain CFSAN007439 VP4_4, whole genome shotgun sequence (395649 bp)
Overview 1 RT 1: 349058-357731 bp Neighborhood of RT #1 [349058, 357731] ANK RVT-UG5 nitrilase Feature: gene Location: 349058-351742 bp Ori: OQU10600.1 Feature: domain Description: ANK Location: 351290-351638 bp Feature: domain Description: ANK Location: 3512 90-351638 bp Feature: gene Location: 352130-352606 bp Feature: gene Location: 352639-355578 bp Ori: OQU10642.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 353134-353605 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 353134-353605 bp Feature: domain Description: nitrilase Location: 354919-355504 bp Feature: domain Description: nitrilase Location: 354919-355504 bp Feature: gene Location: 356134-357252 bp Feature: gene Location: 357252-357731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ANK (smart00248), RVT-UG5, nitrilase (cl11424)