myRT

myRT report for GCA_000707085.2_ASM70708v2

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Seq: JNUL02000008.1 Vibrio parahaemolyticus strain CFSAN007457 VP26_S7__17_consensus, whole genome shotgun sequence (74035 bp)
Overview 1 RT 1: 10349-16949 bp Neighborhood of RT #1 [10349, 17208] COG5361 LysR RVT_N RVT-GII GIIM CspC INT_RitA_C_like Feature: gene Location: 10349-11656 bp Feature: domain Description: COG5361 Location: 10397-11654 bp Feature: domain Description: COG5361 Location: 1 0397-1 1 654 bp Feature: gene Location: 11798-12712 bp Feature: domain Description: LysR Location: 11807-12671 bp Feature: domain Description: LysR Location: 1 1 807-1 2671 bp Feature: gene Location: 13469-14941 bp Feature: RT Description: RVT_N Location: 13517-13760 bp Feature: RT Description: RVT_N Location: 1 351 7-1 3760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13805-14432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3805-1 4432 bp Feature: domain Description: GIIM Note: maturase Location: 14492-14717 bp Feature: domain Description: GIIM Note: maturase Location: 1 4492-1 471 7 bp Feature: gene Location: 16072-16281 bp Feature: domain Description: CspC Location: 16093-16276 bp Feature: domain Description: CspC Location: 1 6093-1 6276 bp Feature: gene Location: 16649-17208 bp Feature: domain Description: INT_RitA_C_like Location: 16694-16949 bp Feature: domain Description: INT_RitA_C_like Location: 1 6694-1 6949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5361 (Uncharacterized conserved protein ), LysR (COG0583), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), CspC (COG1278), INT_RitA_C_like (cd01188)