myRT

myRT report for GCA_000709165.1_1601080v01

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Seq: JMMY01000001.1 Klebsiella pneumoniae 160_1080 ctg7180000000005, whole genome shotgun sequence (5308043 bp)
Overview 1 RT 1: 2534491-2537898 bp 2 RT 2: 2977020-2982568 bp 3 RT 3: 3362362-3367780 bp 4 RT 4: 4719384-4725867 bp Neighborhood of RT #1 [2534491, 2537999] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [2977020, 2982594] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [3362362, 3367782] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [4719384, 4725869] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 2534491-2535222 bp Feature: domain Description: Laminin_G_3 Location: 2534812-2535166 bp Feature: domain Description: Laminin_G_3 Location: 253481 2-25351 66 bp Feature: gene Location: 2535219-2535428 bp Feature: gene Location: 2535878-2537365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2536283-2536973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2536283-2536973 bp Feature: gene Location: 2537443-2537682 bp Feature: gene Location: 2537682-2537999 bp Feature: domain Description: PRK10276 Location: 2537688-2537802 bp Feature: domain Description: PRK1 0276 Location: 2537688-2537802 bp Feature: domain Description: PRK10276 Location: 2537829-2537898 bp Feature: domain Description: PRK1 0276 Location: 2537829-2537898 bp Feature: gene Location: 2977020-2977583 bp Feature: domain Description: YbjK Location: 2977026-2977563 bp Feature: domain Description: YbjK Location: 2977026-2977563 bp Feature: gene Location: 2977706-2978758 bp Feature: domain Description: int Location: 2977709-2978708 bp Feature: domain Description: int Location: 2977709-2978708 bp Feature: gene Location: 2979174-2980661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2979579-2980269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2979579-2980269 bp Feature: gene Location: 2980760-2981704 bp Feature: gene Location: 2981716-2982594 bp Feature: domain Description: Phage_CI_repr Location: 2981743-2981926 bp Feature: domain Description: Phage_CI_repr Location: 2981 743-2981 926 bp Feature: domain Description: Phage_CI_repr Location: 2982055-2982247 bp Feature: domain Description: Phage_CI_repr Location: 2982055-2982247 bp Feature: domain Description: Phage_CI_C Location: 2982274-2982568 bp Feature: domain Description: Phage_CI_C Location: 2982274-2982568 bp Feature: gene Location: 3362362-3363501 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3362545-3363445 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3362545-3363445 bp Feature: gene Location: 3363672-3363914 bp Feature: domain Description: DinI Location: 3363723-3363903 bp Feature: domain Description: DinI Location: 3363723-3363903 bp Feature: gene Location: 3364529-3366016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3364934-3365624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3364934-3365624 bp Feature: gene Location: 3366095-3366514 bp Feature: domain Description: PRK10276 Location: 3366098-3366509 bp Feature: domain Description: PRK1 0276 Location: 3366098-3366509 bp Feature: gene Location: 3366517-3367782 bp Feature: domain Description: umuC Location: 3366520-3367780 bp Feature: domain Description: umuC Location: 3366520-3367780 bp Feature: gene Location: 4719384-4720442 bp Feature: domain Description: YccC Location: 4719390-4720428 bp Feature: domain Description: YccC Location: 471 9390-4720428 bp Feature: gene Location: 4720541-4721014 bp Feature: domain Description: PRK10016 Location: 4720544-4721003 bp Feature: domain Description: PRK1 001 6 Location: 4720544-4721 003 bp Feature: gene Location: 4721096-4722583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4721501-4722191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4721 501 -47221 91 bp Feature: gene Location: 4723101-4724264 bp Feature: domain Description: dacD Location: 4723104-4724259 bp Feature: domain Description: dacD Location: 47231 04-4724259 bp Feature: gene Location: 4724445-4725869 bp Feature: domain Description: SbcB Location: 4724451-4725867 bp Feature: domain Description: SbcB Location: 4724451 -4725867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)