myRT

myRT report for GCA_000709225.1_UHKPC52v01

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Seq: JMSY01000003.1 Klebsiella pneumoniae UHKPC 52 ctg101, whole genome shotgun sequence (162515 bp)
Overview 1 RT 1: 99169-104172 bp Neighborhood of RT #1 [99169, 104174] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 99169-100440 bp Feature: domain Description: umuC Location: 99172-100432 bp Feature: domain Description: umuC Location: 991 72-1 00432 bp Feature: gene Location: 100440-100871 bp Feature: domain Description: PRK10276 Location: 100491-100854 bp Feature: domain Description: PRK1 0276 Location: 1 00491 -1 00854 bp Feature: gene Location: 101277-102764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101682-102372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 682-1 02372 bp Feature: gene Location: 102998-103228 bp Feature: gene Location: 103749-104174 bp Feature: domain Description: Antirestrict Location: 103884-104172 bp Feature: domain Description: Antirestrict Location: 1 03884-1 041 72 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230), umuC (PRK03609)

Seq: JMSY01000001.1 Klebsiella pneumoniae UHKPC 52 ctg01, whole genome shotgun sequence (5321843 bp)
Overview 1 RT 1: 166200-171618 bp 2 RT 2: 1524895-1531378 bp 3 RT 3: 4661356-4664763 bp 4 RT 4: 5102701-5108249 bp Neighborhood of RT #1 [166200, 171620] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #2 [1524895, 1531380] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #3 [4661356, 4664864] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #4 [5102701, 5108275] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Feature: gene Location: 166200-167339 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 166383-167283 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 166383-1672 83 bp Feature: gene Location: 167510-167752 bp Feature: domain Description: DinI Location: 167561-167741 bp Feature: domain Description: DinI Location: 167561-167741 bp Feature: gene Location: 168367-169854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 168772-169462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 168772 -169462 bp Feature: gene Location: 169933-170352 bp Feature: domain Description: PRK10276 Location: 169936-170347 bp Feature: domain Description: PRK102 76 Location: 169936-170347 bp Feature: gene Location: 170355-171620 bp Feature: domain Description: umuC Location: 170358-171618 bp Feature: domain Description: umuC Location: 170358-171618 bp Feature: gene Location: 1524895-1525953 bp Feature: domain Description: YccC Location: 1524901-1525939 bp Feature: domain Description: YccC Location: 152 4901-152 5939 bp Feature: gene Location: 1526052-1526525 bp Feature: domain Description: PRK10016 Location: 1526055-1526514 bp Feature: domain Description: PRK10016 Location: 152 6055-152 6514 bp Feature: gene Location: 1526607-1528094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1527012-1527702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152 7012 -152 7702 bp Feature: gene Location: 1528612-1529775 bp Feature: domain Description: dacD Location: 1528615-1529770 bp Feature: domain Description: dacD Location: 152 8615-152 9770 bp Feature: gene Location: 1529956-1531380 bp Feature: domain Description: SbcB Location: 1529962-1531378 bp Feature: domain Description: SbcB Location: 152 9962 -1531378 bp Feature: gene Location: 4661356-4662087 bp Feature: domain Description: Laminin_G_3 Location: 4661677-4662031 bp Feature: domain Description: Laminin_G_3 Location: 4661677-4662 031 bp Feature: gene Location: 4662084-4662293 bp Feature: gene Location: 4662743-4664230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4663148-4663838 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4663148-4663838 bp Feature: gene Location: 4664308-4664547 bp Feature: gene Location: 4664547-4664864 bp Feature: domain Description: PRK10276 Location: 4664553-4664667 bp Feature: domain Description: PRK102 76 Location: 4664553-4664667 bp Feature: domain Description: PRK10276 Location: 4664694-4664763 bp Feature: domain Description: PRK102 76 Location: 4664694-4664763 bp Feature: gene Location: 5102701-5103264 bp Feature: domain Description: YbjK Location: 5102707-5103244 bp Feature: domain Description: YbjK Location: 5102 707-51032 44 bp Feature: gene Location: 5103387-5104439 bp Feature: domain Description: int Location: 5103390-5104389 bp Feature: domain Description: int Location: 5103390-5104389 bp Feature: gene Location: 5104855-5106342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5105260-5105950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51052 60-5105950 bp Feature: gene Location: 5106441-5107385 bp Feature: gene Location: 5107397-5108275 bp Feature: domain Description: Phage_CI_repr Location: 5107424-5107607 bp Feature: domain Description: Phage_CI_repr Location: 510742 4-5107607 bp Feature: domain Description: Phage_CI_repr Location: 5107736-5107928 bp Feature: domain Description: Phage_CI_repr Location: 5107736-510792 8 bp Feature: domain Description: Phage_CI_C Location: 5107955-5108249 bp Feature: domain Description: Phage_CI_C Location: 5107955-51082 49 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925), Laminin_G_3 (pfam13385)
YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452)