myRT

myRT report for GCA_000710255.1_BTK_A5

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Seq: JMHW01000186.1 Bacillus thuringiensis serovar kurstaki str. HD-1 btkhd1_169, whole genome shotgun sequence (3318 bp)
Overview 1 RT 1: 791-2839 bp Neighborhood of RT #1 [791, 2847] RVT-GII HNHc CwlT_like Feature: gene Location: 791-2587 bp Ori: KEH44802.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1049-1754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 049-1 754 bp Feature: domain Description: HNHc Note: nucleases Location: 2315-2450 bp Feature: domain Description: HNHc Note: nucleases Location: 231 5-2450 bp Feature: gene Location: 2656-2847 bp Ori: KEH44803.1 Feature: domain Description: CwlT_like Location: 2683-2839 bp Feature: domain Description: CwlT_like Location: 2683-2839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), CwlT_like

Seq: JMHW01000119.1 Bacillus thuringiensis serovar kurstaki str. HD-1 btkhd1_176, whole genome shotgun sequence (2784 bp)
Overview 1 RT 1: 19-2657 bp Neighborhood of RT #1 [19, 2657] DDE_Tnp_1 RVT-GII GIIM Feature: gene Location: 19-309 bp Ori: KEH46653.1 Feature: domain Description: DDE_Tnp_1 Location: 106-295 bp Feature: domain Description: DDE_Tnp_1 Location: 106-2 95 bp Feature: gene Location: 814-2121 bp Ori: KEH46654.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1099-1738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1099-1738 bp Feature: domain Description: GIIM Note: maturase Location: 1813-2038 bp Feature: domain Description: GIIM Note: maturase Location: 1813-2 038 bp Feature: gene Location: 2397-2657 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388)

Seq: JMHW01000125.1 Bacillus thuringiensis serovar kurstaki str. HD-1 btkhd1_102, whole genome shotgun sequence (14411 bp)
Overview 1 RT 1: 5044-14231 bp Neighborhood of RT #1 [5044, 14231] RapH_N TPR TPR PRK13922 AE_Prim_S_like RVT-UG10 Feature: gene Location: 5044-6135 bp Ori: KEH46299.1 Feature: domain Description: RapH_N Location: 5065-5236 bp Feature: domain Description: RapH_N Location: 5065-523 6 bp Feature: domain Description: TPR Location: 5371-5638 bp Feature: domain Description: TPR Location: 53 71-563 8 bp Feature: domain Description: TPR Location: 5683-6094 bp Feature: domain Description: TPR Location: 5683 -6094 bp Feature: gene Location: 6613-6825 bp Ori: KEH46300.1 Feature: domain Description: PRK13922 Location: 6685-6805 bp Feature: domain Description: PRK13 922 Location: 6685-6805 bp Feature: gene Location: 7101-12740 bp Ori: KEH46301.1 Feature: domain Description: AE_Prim_S_like Location: 7311-7530 bp Feature: domain Description: AE_Prim_S_like Location: 73 11-753 0 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 8517-9171 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 8517-9171 bp Feature: gene Location: 13179-13604 bp Feature: gene Location: 13614-14231 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RapH_N (pfam18801), TPR (smart00028), PRK13922 (rod shape-determining protein MreC; Provisional), AE_Prim_S_like (cl01287), RVT-UG10

Seq: JMHW01000141.1 Bacillus thuringiensis serovar kurstaki str. HD-1 btkhd1_83, whole genome shotgun sequence (18815 bp)
Overview 1 RT 1: 10687-16139 bp Neighborhood of RT #1 [10687, 16303] Rve RVT-GII GIIM DDE_Tnp_1 metallo-hydrolase-like_MBL-fold Feature: gene Location: 10687-11220 bp Ori: KEH45989.1 Feature: domain Description: Rve Location: 10690-11212 bp Feature: domain Description: Rve Location: 10690-11212 bp Feature: gene Location: 11594-12040 bp Feature: gene Location: 12374-13681 bp Ori: KEH45991.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12659-13298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12659-13298 bp Feature: domain Description: GIIM Note: maturase Location: 13373-13598 bp Feature: domain Description: GIIM Note: maturase Location: 13373-13598 bp Feature: gene Location: 14186-15244 bp Ori: KEH45992.1 Feature: domain Description: DDE_Tnp_1 Location: 14546-15230 bp Feature: domain Description: DDE_Tnp_1 Location: 14 54 6-15230 bp Feature: gene Location: 15383-16303 bp Ori: KEH45993.1 Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 15437-16139 bp Feature: domain Description: metallo-hydrolase-like_MBL-fold Location: 154 37-16139 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, GIIM (pfam08388), DDE_Tnp_1 (pfam01609), metallo-hydrolase-like_MBL-fold (cl23716)

Seq: JMHW01000080.1 Bacillus thuringiensis serovar kurstaki str. HD-1 btkhd1_94, whole genome shotgun sequence (15831 bp)
Overview 1 RT 1: 4-4874 bp Neighborhood of RT #1 [4, 5053] RVT-GII GIIM TraG-D_C Ftsk_gamma Ftsk_gamma rpsA Feature: gene Location: 4-1878 bp Ori: KEH48018.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304-1009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304-1009 bp Feature: domain Description: GIIM Note: maturase Location: 1123-1291 bp Feature: domain Description: GIIM Note: maturase Location: 1123-1291 bp Feature: gene Location: 2111-3811 bp Ori: KEH48019.1 Feature: domain Description: TraG-D_C Location: 2123-2441 bp Feature: domain Description: TraG-D_C Location: 2123-2441 bp Feature: domain Description: Ftsk_gamma Location: 2801-2981 bp Feature: domain Description: Ftsk_gamma Location: 2801-2981 bp Feature: domain Description: Ftsk_gamma Location: 3134-3308 bp Feature: domain Description: Ftsk_gamma Location: 3134-3308 bp Feature: gene Location: 4070-5053 bp Ori: KEH48020.1 Feature: domain Description: rpsA Location: 4337-4874 bp Feature: domain Description: rpsA Location: 4337-4874 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), rpsA (TIGR00717)

Seq: JMHW01000089.1 Bacillus thuringiensis serovar kurstaki str. HD-1 btkhd1_178, whole genome shotgun sequence (2705 bp)
Overview 1 RT 1: 751-2416 bp Neighborhood of RT #1 [751, 2547] RVT-GII HNHc Feature: gene Location: 751-2547 bp Ori: KEH47882.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1045-1741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1045-1741 bp Feature: domain Description: HNHc Note: nucleases Location: 2341-2416 bp Feature: domain Description: HNHc Note: nucleases Location: 2341-2416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: JMHW01000053.1 Bacillus thuringiensis serovar kurstaki str. HD-1 btkhd1_182, whole genome shotgun sequence (2608 bp)
Overview 1 RT 1: 100-1789 bp Neighborhood of RT #1 [100, 1905] RVT-GII HNHc Feature: gene Location: 100-1905 bp Ori: KEH49354.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394-1090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394-1090 bp Feature: domain Description: HNHc Note: nucleases Location: 1651-1789 bp Feature: domain Description: HNHc Note: nucleases Location: 1651-17 89 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: JMHW01000128.1 Bacillus thuringiensis serovar kurstaki str. HD-1 btkhd1_91, whole genome shotgun sequence (16726 bp)
Overview 1 RT 1: 13280-16115 bp Neighborhood of RT #1 [13280, 16138] NlpD Spr RVT-GII Intron_maturas2 HNHc Feature: gene Location: 13280-14155 bp Ori: KEH46251.1 Feature: domain Description: NlpD Location: 13295-13724 bp Feature: domain Description: NlpD Location: 13295-13724 bp Feature: domain Description: Spr Location: 13760-14096 bp Feature: domain Description: Spr Location: 13760-14096 bp Feature: gene Location: 14179-14313 bp Feature: gene Location: 14315-16138 bp Ori: KEH46253.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14579-15413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14579-15413 bp Feature: domain Description: Intron_maturas2 Location: 15482-15821 bp Feature: domain Description: Intron_maturas2 Location: 1548 2-158 21 bp Feature: domain Description: HNHc Note: nucleases Location: 15959-16115 bp Feature: domain Description: HNHc Note: nucleases Location: 15959-16115 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NlpD (COG0739), Spr (COG0791), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: JMHW01000140.1 Bacillus thuringiensis serovar kurstaki str. HD-1 btkhd1_92, whole genome shotgun sequence (16587 bp)
Overview 1 RT 1: 7701-16434 bp Neighborhood of RT #1 [7701, 16434] Ftsk_gamma RVT-GII GIIM HNHc RVT-GII HNHc Feature: gene Location: 7701-8471 bp Feature: gene Location: 8743-10392 bp Ori: KEH46007.1 Feature: domain Description: Ftsk_gamma Location: 9337-9517 bp Feature: domain Description: Ftsk_gamma Location: 9 337-9 517 bp Feature: gene Location: 10766-12640 bp Ori: KEH46008.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11066-11771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11066-11771 bp Feature: domain Description: GIIM Note: maturase Location: 11885-12053 bp Feature: domain Description: GIIM Note: maturase Location: 11885-12053 bp Feature: domain Description: HNHc Note: nucleases Location: 12401-12566 bp Feature: domain Description: HNHc Note: nucleases Location: 12401-12566 bp Feature: gene Location: 13313-13750 bp Feature: gene Location: 13816-15606 bp Ori: KEH46010.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14113-14809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14113-14809 bp Feature: domain Description: HNHc Note: nucleases Location: 15349-15481 bp Feature: domain Description: HNHc Note: nucleases Location: 15349 -15481 bp Feature: gene Location: 16288-16434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ftsk_gamma (smart00843), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JMHW01000099.1 Bacillus thuringiensis serovar kurstaki str. HD-1 btkhd1_26, whole genome shotgun sequence (67359 bp)
Overview 1 RT 1: 25080-32309 bp Neighborhood of RT #1 [25080, 32309] KOG1000 KOG1000 RVT-GII GIIM Feature: gene Location: 25080-25793 bp Feature: gene Location: 25810-28215 bp Ori: KEH47475.1 Feature: domain Description: KOG1000 Location: 26521-26737 bp Feature: domain Description: KOG10 00 Location: 26521-26737 bp Feature: domain Description: KOG1000 Location: 27340-27673 bp Feature: domain Description: KOG10 00 Location: 27340-27673 bp Feature: gene Location: 28490-30355 bp Ori: KEH47476.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28790-29495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28790-29495 bp Feature: domain Description: GIIM Note: maturase Location: 29582-29765 bp Feature: domain Description: GIIM Note: maturase Location: 29582-29765 bp Feature: gene Location: 31102-32010 bp Feature: gene Location: 32082-32309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, GIIM (pfam08388)

Seq: JMHW01000096.1 Bacillus thuringiensis serovar kurstaki str. HD-1 btkhd1_172, whole genome shotgun sequence (2925 bp)
Overview 1 RT 1: 613-2721 bp Neighborhood of RT #1 [613, 2721] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 613-2436 bp Ori: KEH47639.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 883-1711 bp Feature: domain Description: Intron_maturas2 Location: 1783-2101 bp Feature: domain Description: Intron_maturas2 Location: 1783-2101 bp Feature: domain Description: HNHc Note: nucleases Location: 2254-2407 bp Feature: domain Description: HNHc Note: nucleases Location: 2254-2407 bp Feature: gene Location: 2575-2721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)