myRT

myRT report for GCA_000711115.1_B2_433

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Seq: AUYZ01000011.1 Clostridium botulinum B2 433 plasmid p1_433B2, whole genome shotgun sequence (266695 bp)
Overview 1 RT 1: 10524-13157 bp Neighborhood of RT #1 [10524, 13249] RVT-GII HNHc Feature: gene Location: 10524-10796 bp Feature: gene Location: 10986-11183 bp Feature: gene Location: 11375-13249 bp Ori: KEI83928.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11693-12389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 693-1 2389 bp Feature: domain Description: HNHc Note: nucleases Location: 12992-13157 bp Feature: domain Description: HNHc Note: nucleases Location: 1 2992-1 31 57 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: AUYZ01000008.1 Clostridium botulinum B2 433 B2_433_contig008, whole genome shotgun sequence (2803320 bp)
Overview 1 RT 1: 2460737-2465900 bp Neighborhood of RT #1 [2460737, 2466094] Uup PBP2_LTTR_substrate RVT-GII Beta-lactamase AcrR Feature: gene Location: 2460737-2462215 bp Ori: KEI90502.1 Feature: domain Description: Uup Location: 2460740-2462210 bp Feature: domain Description: Uup Location: 2 460740-2 462 2 10 bp Feature: gene Location: 2462664-2462933 bp Ori: KEI90503.1 Feature: domain Description: PBP2_LTTR_substrate Location: 2462724-2462910 bp Feature: domain Description: PBP2 _LTTR_substrate Location: 2 462 72 4-2 462 910 bp Feature: gene Location: 2463071-2463289 bp Ori: KEI90504.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2463077-2463206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 463077-2 4632 06 bp Feature: gene Location: 2463922-2465019 bp Ori: KEI90505.1 Feature: domain Description: Beta-lactamase Location: 2463964-2464963 bp Feature: domain Description: Beta-lactamase Location: 2 463964-2 464963 bp Feature: gene Location: 2465480-2466094 bp Ori: KEI90506.1 Feature: domain Description: AcrR Location: 2465495-2465900 bp Feature: domain Description: AcrR Location: 2 465495-2 465900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Uup (COG0488), PBP2_LTTR_substrate (cd05466), RVT-GII, Beta-lactamase (pfam00144), AcrR (COG1309)