myRT

myRT report for GCA_000711355.1_ASM71135v1

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Seq: JOMY01000197.1 (17499 bp)
Overview 1 RT 1: 13363-17052 bp Neighborhood of RT #1 [13363, 17054] AAA_15 TOPRIM_OLD PHA02517 RVT-GII GIIM YkfC Feature: gene Location: 13363-14811 bp Ori: KEJ36380.1 Feature: domain Description: AAA_15 Location: 13948-14083 bp Feature: domain Description: AAA_1 5 Location: 1 3948-1 4083 bp Feature: domain Description: TOPRIM_OLD Location: 14248-14500 bp Feature: domain Description: TOPRIM_OLD Location: 1 4248-1 4500 bp Feature: gene Location: 14982-15353 bp Ori: KEJ36364.1 Feature: domain Description: PHA02517 Location: 14985-15351 bp Feature: domain Description: PHA0251 7 Location: 1 4985-1 5351 bp Feature: gene Location: 15545-16378 bp Ori: KEJ36365.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15551-15860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5551 -1 5860 bp Feature: domain Description: GIIM Note: maturase Location: 15935-16154 bp Feature: domain Description: GIIM Note: maturase Location: 1 5935-1 61 54 bp Feature: gene Location: 16908-17054 bp Ori: KEJ36367.1 Feature: domain Description: YkfC Location: 16917-17052 bp Feature: domain Description: YkfC Location: 1 691 7-1 7052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), TOPRIM_OLD (cd01026), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), YkfC (COG3344)

Seq: JOMY01000017.1 (33182 bp)
Overview 1 RT 1: 30201-33183 bp Neighborhood of RT #1 [30201, 33182] DUF2517 RVT-GII GIIM PRK09413 Feature: gene Location: 30201-30407 bp Ori: KEJ51313.1 Feature: domain Description: DUF2517 Location: 30213-30390 bp Feature: domain Description: DUF2 517 Location: 302 13-30390 bp Feature: gene Location: 30408-30536 bp Feature: gene Location: 30920-32308 bp Ori: KEJ51324.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31250-31868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 312 50-31868 bp Feature: domain Description: GIIM Note: maturase Location: 31916-32147 bp Feature: domain Description: GIIM Note: maturase Location: 31916-32 147 bp Feature: gene Location: 32868-33182 bp Ori: KEJ51312.1 Feature: domain Description: PRK09413 Location: 32871-33183 bp Feature: domain Description: PRK09413 Location: 32 871-33183 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2517 (pfam10725), RVT-GII, GIIM (pfam08388), PRK09413 (IS2 repressor TnpA; Reviewed)

Seq: JOMY01000130.1 (15533 bp)
Overview 1 RT 1: 13457-15519 bp Neighborhood of RT #1 [13457, 15533] PHA02517 YkfC RVT-GII Feature: gene Location: 13457-13936 bp Ori: KEJ39747.1 Feature: domain Description: PHA02517 Location: 13517-13871 bp Feature: domain Description: PHA02517 Location: 13 517-13 871 bp Feature: gene Location: 14528-14674 bp Ori: KEJ39741.1 Feature: domain Description: YkfC Location: 14537-14672 bp Feature: domain Description: YkfC Location: 1453 7-14672 bp Feature: gene Location: 15204-15533 bp Ori: KEJ39750.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15210-15519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15210-15519 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), YkfC (COG3344), RVT-GII

Seq: JOMY01000191.1 (7003 bp)
Overview 1 RT 1: 1-2088 bp Neighborhood of RT #1 [1, 2153] RVT-GII YkfC PHA02517 Feature: gene Location: 1-460 bp Ori: KEJ36450.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-316 bp Feature: gene Location: 990-1136 bp Ori: KEJ36449.1 Feature: domain Description: YkfC Location: 999-1134 bp Feature: domain Description: YkfC Location: 999-1134 bp Feature: gene Location: 1728-2153 bp Ori: KEJ36452.1 Feature: domain Description: PHA02517 Location: 1752-2088 bp Feature: domain Description: PHA02517 Location: 1752-2088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, YkfC (COG3344), PHA02517 (putative transposase OrfB; Reviewed)