myRT

myRT report for GCA_000711375.1_ASM71137v1

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Seq: JOMS01000091.1 (17588 bp)
Overview 1 RT 1: 8757-12140 bp Neighborhood of RT #1 [8757, 12205] RVT-GII GIIM PHA02517 Feature: gene Location: 8757-9014 bp Feature: gene Location: 9336-9470 bp Feature: gene Location: 9665-11173 bp Ori: KEJ17117.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9923-10655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9923-1 0655 bp Feature: domain Description: GIIM Note: maturase Location: 10730-10928 bp Feature: domain Description: GIIM Note: maturase Location: 1 0730-1 0928 bp Feature: gene Location: 11212-11334 bp Feature: gene Location: 11780-12205 bp Ori: KEJ17119.1 Feature: domain Description: PHA02517 Location: 11804-12140 bp Feature: domain Description: PHA0251 7 Location: 1 1 804-1 21 40 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JOMS01000049.1 (91501 bp)
Overview 1 RT 1: 17065-22458 bp Neighborhood of RT #1 [17065, 22463] lnt PRK09413 RVT-GII GIIM PinE Feature: gene Location: 17065-18276 bp Ori: KEJ19563.1 Feature: domain Description: lnt Location: 17368-18094 bp Feature: domain Description: lnt Location: 17368-18094 bp Feature: gene Location: 19171-19368 bp Ori: KEJ19564.1 Feature: domain Description: PRK09413 Location: 19174-19336 bp Feature: domain Description: PRK09413 Location: 19174-19336 bp Feature: gene Location: 19844-21196 bp Ori: KEJ19565.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20165-20783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0165-2 0783 bp Feature: domain Description: GIIM Note: maturase Location: 20831-21062 bp Feature: domain Description: GIIM Note: maturase Location: 2 0831-2 1062 bp Feature: gene Location: 21405-21806 bp Feature: gene Location: 21906-22463 bp Ori: KEJ19567.1 Gene: tnpR Feature: domain Description: PinE Location: 21909-22458 bp Feature: domain Description: PinE Location: 2 1909-2 2 458 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lnt (TIGR00546), PRK09413 (IS2 repressor TnpA; Reviewed), RVT-GII, GIIM (pfam08388), PinE (COG1961)

Seq: JOMS01000011.1 (8549 bp)
Overview 1 RT 1: 581-6612 bp Neighborhood of RT #1 [581, 6749] SfsB RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 581-721 bp Ori: KEJ20293.1 Feature: domain Description: SfsB Location: 590-662 bp Feature: domain Description: SfsB Location: 590-662 bp Feature: gene Location: 718-1188 bp Feature: gene Location: 1535-4744 bp Ori: KEJ20295.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2063-2552 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2063 -2552 bp Feature: domain Description: nitrilase Location: 4058-4655 bp Feature: domain Description: nitrilase Location: 4058-4655 bp Feature: gene Location: 5060-5842 bp Ori: KEJ20296.1 Feature: domain Description: AbiEi_3_N Location: 5072-5333 bp Feature: domain Description: AbiEi_3 _N Location: 5072-53 3 3 bp Feature: domain Description: AbiEi_3 Location: 5345-5801 bp Feature: domain Description: AbiEi_3 Location: 53 45-5801 bp Feature: gene Location: 5829-6749 bp Ori: KEJ20297.1 Feature: domain Description: AbiEii Location: 5871-6612 bp Feature: domain Description: AbiEii Location: 5871-6612 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SfsB (COG3423), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)