myRT

myRT report for GCA_000711565.1_ASM71156v1

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Seq: JONA01000129.1 (16686 bp)
Overview 1 RT 1: 12515-16216 bp Neighborhood of RT #1 [12515, 16470] PRK15224 group_II_RT_mat RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66_C DD_cGKI COG3436 Feature: gene Location: 12515-13264 bp Feature: domain Description: PRK15224 Location: 12560-13244 bp Feature: domain Description: PRK1 5224 Location: 1 2560-1 3244 bp Feature: gene Location: 14092-14310 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 14209-14302 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 4209-1 4302 bp Feature: gene Location: 14572-15051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14578-14989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4578-1 4989 bp Feature: gene Location: 15085-15450 bp Feature: domain Description: DDE_Tnp_IS66 Location: 15106-15262 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 51 06-1 5262 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 15316-15427 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 531 6-1 5427 bp Feature: gene Location: 15463-16470 bp Feature: domain Description: DD_cGKI Location: 15502-15607 bp Feature: domain Description: DD_cGKI Location: 1 5502-1 5607 bp Feature: domain Description: COG3436 Location: 15736-16216 bp Feature: domain Description: COG3436 Location: 1 5736-1 621 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15224 (pili assembly chaperone PapD), group_II_RT_mat (TIGR04416), RVT-GII, DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), DD_cGKI (cl17044), COG3436 (Transposase )

Seq: JONA01000075.1 (239473 bp)
Overview 1 RT 1: 147601-152201 bp 2 RT 2: 162314-165816 bp Neighborhood of RT #1 [147601, 152206] RVT-GII RVT-GII GIIM LacI PBP1_GntR Neighborhood of RT #2 [162314, 165816] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 147601-147804 bp Feature: gene Location: 148155-148481 bp Feature: gene Location: 149390-149824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149582-149798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149582 -149798 bp Feature: gene Location: 149953-150648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149956-150208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149956-1502 08 bp Feature: domain Description: GIIM Note: maturase Location: 150256-150478 bp Feature: domain Description: GIIM Note: maturase Location: 1502 56-150478 bp Feature: gene Location: 150956-151093 bp Feature: gene Location: 151175-152206 bp Feature: domain Description: LacI Location: 151217-151352 bp Feature: domain Description: LacI Location: 1512 17-151352 bp Feature: domain Description: PBP1_GntR Location: 151391-152201 bp Feature: domain Description: PBP1_GntR Location: 151391-152 2 01 bp Feature: gene Location: 162314-162793 bp Feature: domain Description: PHA02517 Location: 162374-162728 bp Feature: domain Description: PHA02 517 Location: 162 374-162 72 8 bp Feature: gene Location: 163239-163361 bp Feature: gene Location: 163400-164908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163658-164390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163658-164390 bp Feature: domain Description: GIIM Note: maturase Location: 164465-164663 bp Feature: domain Description: GIIM Note: maturase Location: 164465-164663 bp Feature: gene Location: 165061-165237 bp Feature: domain Description: PHA02517 Location: 165064-165166 bp Feature: domain Description: PHA02 517 Location: 165064-165166 bp Feature: gene Location: 165559-165816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), LacI (pfam00356), PBP1_GntR (cd01575), PHA02517 (putative transposase OrfB; Reviewed)