myRT

myRT report for GCA_000711595.1_ASM71159v1

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Seq: JOND01000162.1 (4127 bp)
Overview 1 RT 1: 74-4126 bp Neighborhood of RT #1 [74, 4127] RVT-GII GIIM PAAR_2 RhsA RhsA RhsA Feature: gene Location: 74-769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77-329 bp Feature: domain Description: GIIM Note: maturase Location: 377-608 bp Feature: domain Description: GIIM Note: maturase Location: 377-608 bp Feature: gene Location: 1030-4127 bp Feature: domain Description: PAAR_2 Location: 1036-1117 bp Feature: domain Description: PAAR_2 Location: 1 036-1 1 1 7 bp Feature: domain Description: RhsA Location: 2020-2179 bp Feature: domain Description: RhsA Location: 2020-21 79 bp Feature: domain Description: RhsA Location: 2233-2572 bp Feature: domain Description: RhsA Location: 2233-2572 bp Feature: domain Description: RhsA Location: 2635-4126 bp Feature: domain Description: RhsA Location: 2635-41 26 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PAAR_2 (cd14738), RhsA (COG3209), RVT-GII, GIIM (pfam08388)

Seq: JOND01000010.1 (2047 bp)
Overview 1 RT 1: 447-1710 bp Neighborhood of RT #1 [447, 1955] RVT-GII GIIM Feature: gene Location: 447-1955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 705-1437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 705-1437 bp Feature: domain Description: GIIM Note: maturase Location: 1512-1710 bp Feature: domain Description: GIIM Note: maturase Location: 1512 -1710 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JOND01000065.1 (2043 bp)
Overview 1 RT 1: 6-2043 bp Neighborhood of RT #1 [6, 2043] PHA02517 RVT-GII GIIM Feature: gene Location: 6-209 bp Feature: domain Description: PHA02517 Location: 9-144 bp Feature: domain Description: PHA02517 Location: 9-144 bp Feature: gene Location: 816-2043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1074-1806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1074-1806 bp Feature: domain Description: GIIM Note: maturase Location: 1881-2043 bp Feature: domain Description: GIIM Note: maturase Location: 1881-2043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JOND01000124.1 (7378 bp)
Overview 1 RT 1: 1-2604 bp Neighborhood of RT #1 [1, 2618] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 1-1228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-991 bp Feature: domain Description: GIIM Note: maturase Location: 1066-1228 bp Feature: domain Description: GIIM Note: maturase Location: 1066-1228 bp Feature: gene Location: 1835-2260 bp Feature: domain Description: PHA02517 Location: 1859-2195 bp Feature: domain Description: PHA02517 Location: 1859-2195 bp Feature: gene Location: 2316-2618 bp Feature: domain Description: InsE Location: 2355-2604 bp Feature: domain Description: InsE Location: 2355-2604 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: JOND01000056.1 (41161 bp)
Overview 1 RT 1: 1-4042 bp Neighborhood of RT #1 [1, 4044] PRK09413 RVT-GII GIIM PRK15185 Tra5 Feature: gene Location: 1-133 bp Feature: domain Description: PRK09413 Location: 4-133 bp Feature: domain Description: PRK09413 Location: 4-133 bp Feature: gene Location: 693-2081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1023-1641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1023-1641 bp Feature: domain Description: GIIM Note: maturase Location: 1689-1920 bp Feature: domain Description: GIIM Note: maturase Location: 1689-1920 bp Feature: gene Location: 2639-3430 bp Feature: domain Description: PRK15185 Location: 3035-3407 bp Feature: domain Description: PRK15 185 Location: 3035 -3407 bp Feature: gene Location: 3850-4044 bp Feature: domain Description: Tra5 Location: 3895-4042 bp Feature: domain Description: Tra5 Location: 3895 -4042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15185 (transcriptional regulator HilD; Provisional), Tra5 (COG2801), RVT-GII, GIIM (pfam08388)