myRT

myRT report for GCA_000711825.1_ASM71182v1

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Seq: JONJ01000002.1 [Clostridium] aminophilum DSM 10710 BR86DRAFT_scaffold00002.2_C, whole genome shotgun sequence (325468 bp)
Overview 1 RT 1: 3685-10355 bp Neighborhood of RT #1 [3685, 10375] KOG0260 RVT-GII GIIM RpoE DUF4367 Feature: gene Location: 3685-6588 bp Feature: domain Description: KOG0260 Location: 5959-6286 bp Feature: domain Description: KOG0260 Location: 5959-6286 bp Feature: gene Location: 6647-7102 bp Feature: gene Location: 7172-8569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7493-8117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7493-81 1 7 bp Feature: domain Description: GIIM Note: maturase Location: 8171-8390 bp Feature: domain Description: GIIM Note: maturase Location: 81 71 -8390 bp Feature: gene Location: 9064-9579 bp Feature: domain Description: RpoE Location: 9076-9559 bp Feature: domain Description: RpoE Location: 9076-9559 bp Feature: gene Location: 9566-10375 bp Feature: domain Description: DUF4367 Location: 10049-10355 bp Feature: domain Description: DUF4367 Location: 1 0049-1 0355 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG0260 (KOG0260, RNA polymerase II, large subunit ), RVT-GII, GIIM (pfam08388), RpoE (COG3343), DUF4367 (pfam14285)

Seq: JONJ01000010.1 [Clostridium] aminophilum DSM 10710 BR86DRAFT_scaffold00009.9_C, whole genome shotgun sequence (147563 bp)
Overview 1 RT 1: 51406-55111 bp Neighborhood of RT #1 [51406, 55224] trpA RVT-GII GIIM Cytidylate_kin2 Feature: gene Location: 51406-52200 bp Feature: domain Description: trpA Location: 51454-52195 bp Feature: domain Description: trpA Location: 51454-52 195 bp Feature: gene Location: 52298-52444 bp Feature: gene Location: 52716-54113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53037-53661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53037-53661 bp Feature: domain Description: GIIM Note: maturase Location: 53715-53934 bp Feature: domain Description: GIIM Note: maturase Location: 53715-53934 bp Feature: gene Location: 54237-54437 bp Feature: gene Location: 54544-55224 bp Feature: domain Description: Cytidylate_kin2 Location: 54565-55111 bp Feature: domain Description: Cytidylate_kin2 Location: 54565-55111 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT trpA (TIGR00262), RVT-GII, GIIM (pfam08388), Cytidylate_kin2 (pfam13189)

Seq: JONJ01000015.1 [Clostridium] aminophilum DSM 10710 BR86DRAFT_scaffold00014.14_C, whole genome shotgun sequence (88578 bp)
Overview 1 RT 1: 43103-50353 bp Neighborhood of RT #1 [43103, 50364] NHLM_micro_ABC2 NHLM_micro_ABC1 RVT-UG26 cNMP_binding acetolactate_decarboxylase Feature: gene Location: 43103-45268 bp Feature: domain Description: NHLM_micro_ABC2 Location: 43379-45263 bp Feature: domain Description: NHLM_micro_ABC2 Location: 43 3 79-45263 bp Feature: gene Location: 45279-47399 bp Feature: domain Description: NHLM_micro_ABC1 Location: 45285-47394 bp Feature: domain Description: NHLM_micro_ABC1 Location: 45285-473 94 bp Feature: gene Location: 47731-48948 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 47956-48565 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 47956-48565 bp Feature: gene Location: 48960-49475 bp Feature: domain Description: cNMP_binding Location: 48993-49245 bp Feature: domain Description: cNMP_binding Location: 48993 -49245 bp Feature: gene Location: 49579-50364 bp Feature: domain Description: acetolactate_decarboxylase Location: 49654-50353 bp Feature: domain Description: acetolactate_decarboxylase Location: 49654-503 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NHLM_micro_ABC2 (TIGR03797), NHLM_micro_ABC1 (TIGR03796), RVT-UG26, cNMP_binding (pfam00027), acetolactate_decarboxylase (cd17299)

Seq: JONJ01000036.1 [Clostridium] aminophilum DSM 10710 BR86DRAFT_scaffold00035.35_C, whole genome shotgun sequence (1942 bp)
Overview 1 RT 1: 264-1688 bp Neighborhood of RT #1 [264, 1870] RVT-GII GIIM Feature: gene Location: 264-416 bp Feature: gene Location: 476-1870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 794-1418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 794 -14 18 bp Feature: domain Description: GIIM Note: maturase Location: 1475-1688 bp Feature: domain Description: GIIM Note: maturase Location: 14 75-1688 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)