myRT

myRT report for GCA_000711885.1_ASM71188v1

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Seq: JONK01000026.1 Chromobacterium haemolyticum DSM 19808 BR71DRAFT_scaffold00023.23_C, whole genome shotgun sequence (83495 bp)
Overview 1 RT 1: 21159-24500 bp Neighborhood of RT #1 [21159, 24556] RVT-UG1 cNMP_binding HTH_Crp_2 HTH_Crp_2 Feature: gene Location: 21159-22019 bp Feature: gene Location: 22453-22635 bp Feature: gene Location: 22671-22928 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 22674-22887 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 22674-22887 bp Feature: gene Location: 22983-23708 bp Feature: domain Description: cNMP_binding Location: 23097-23328 bp Feature: domain Description: cNMP_binding Location: 23097-23328 bp Feature: domain Description: HTH_Crp_2 Location: 23439-23634 bp Feature: domain Description: HTH_Crp_2 Location: 23439-23634 bp Feature: gene Location: 23864-24556 bp Feature: domain Description: HTH_Crp_2 Location: 24302-24500 bp Feature: domain Description: HTH_Crp_2 Location: 24302-24500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG1, cNMP_binding (pfam00027), HTH_Crp_2 (pfam13545)

Seq: JONK01000055.1 Chromobacterium haemolyticum DSM 19808 BR71DRAFT_scaffold00052.52_C, whole genome shotgun sequence (6496 bp)
Overview 1 RT 1: 898-4292 bp Neighborhood of RT #1 [898, 4513] DEDD_Tnp_IS110 PHA02517 RVT-GII GIIM IS5 PI-PLCc_BcPLC_like Feature: gene Location: 898-1158 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 922-1153 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 92 2 -1153 bp Feature: gene Location: 1237-1707 bp Feature: domain Description: PHA02517 Location: 1309-1579 bp Feature: domain Description: PHA02 517 Location: 1309-1579 bp Feature: gene Location: 1718-2737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1721-2351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 172 1-2 351 bp Feature: domain Description: GIIM Note: maturase Location: 2429-2651 bp Feature: domain Description: GIIM Note: maturase Location: 2 42 9-2 651 bp Feature: gene Location: 2712-3107 bp Feature: domain Description: IS5 Location: 2727-2979 bp Feature: domain Description: IS5 Location: 2 72 7-2 979 bp Feature: gene Location: 3332-4513 bp Feature: domain Description: PI-PLCc_BcPLC_like Location: 3455-4292 bp Feature: domain Description: PI-PLCc_BcPLC_like Location: 3455-42 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEDD_Tnp_IS110 (pfam01548), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), IS5 (COG3039), PI-PLCc_BcPLC_like (cd08586)