myRT

myRT report for GCA_000713115.1_ASM71311v1

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Seq: JORJ01000208.1 (13749 bp)
Overview 1 RT 1: 10099-13749 bp Neighborhood of RT #1 [10099, 13749] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 10099-10425 bp Ori: KEM52800.1 Feature: domain Description: InsE Location: 10102-10423 bp Feature: domain Description: InsE Location: 1 01 02-1 0423 bp Feature: gene Location: 10425-10904 bp Ori: KEM52801.1 Feature: domain Description: PHA02517 Location: 10485-10839 bp Feature: domain Description: PHA0251 7 Location: 1 0485-1 0839 bp Feature: gene Location: 11511-13019 bp Ori: KEM52802.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11769-12501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 769-1 2501 bp Feature: domain Description: GIIM Note: maturase Location: 12576-12774 bp Feature: domain Description: GIIM Note: maturase Location: 1 2576-1 2774 bp Feature: gene Location: 13136-13582 bp Ori: KEM52803.1 Feature: domain Description: PHA02517 Location: 13139-13580 bp Feature: domain Description: PHA0251 7 Location: 1 31 39-1 3580 bp Feature: gene Location: 13625-13749 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JORJ01000066.1 (312461 bp)
Overview 1 RT 1: 129230-136679 bp Neighborhood of RT #1 [129230, 136696] IstB_IS21_ATP IstB_IS21 RVT-Retrons RVT-AbiP2 Phage_GPA DUF5405 Feature: gene Location: 129230-129979 bp Ori: KEM66985.1 Feature: domain Description: IstB_IS21_ATP Location: 129302-129386 bp Feature: domain Description: IstB_IS2 1_ATP Location: 12 9302 -12 9386 bp Feature: domain Description: IstB_IS21 Location: 129389-129917 bp Feature: domain Description: IstB_IS2 1 Location: 12 9389-12 9917 bp Feature: gene Location: 130066-130230 bp Feature: gene Location: 130770-131954 bp Ori: KEM66987.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 130914-131496 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 130914-131496 bp Feature: gene Location: 132019-132135 bp Feature: gene Location: 132329-134041 bp Ori: KEM66989.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 132911-133364 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 132 911-133364 bp Feature: gene Location: 134146-136284 bp Ori: KEM66990.1 Feature: domain Description: Phage_GPA Location: 134398-135385 bp Feature: domain Description: Phage_GPA Location: 134398-135385 bp Feature: gene Location: 136421-136696 bp Ori: KEM66991.1 Feature: domain Description: DUF5405 Location: 136439-136679 bp Feature: domain Description: DUF5405 Location: 136439-136679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), RVT-Retrons, RVT-AbiP2, Phage_GPA (pfam05840), DUF5405 (pfam17399)