myRT

myRT report for GCA_000713315.1_ASM71331v1

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Seq: JORQ01000078.1 (48575 bp)
Overview 1 RT 1: 719-5828 bp Neighborhood of RT #1 [719, 5833] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 719-1066 bp Feature: domain Description: TnpB_IS66 Location: 746-1037 bp Feature: domain Description: TnpB_IS66 Location: 746-1 037 bp Feature: gene Location: 1086-2657 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1224-1449 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 224-1 449 bp Feature: domain Description: zf-IS66 Location: 1470-1602 bp Feature: domain Description: zf-IS66 Location: 1 470-1 602 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1647-2502 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 647-2502 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2523-2634 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2523-2634 bp Feature: gene Location: 3082-4983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3349-4180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3349-41 80 bp Feature: domain Description: Intron_maturas2 Location: 4294-4552 bp Feature: domain Description: Intron_maturas2 Location: 4294-4552 bp Feature: domain Description: HNHc Note: nucleases Location: 4726-4888 bp Feature: domain Description: HNHc Note: nucleases Location: 4726-4888 bp Feature: gene Location: 5193-5543 bp Feature: domain Description: PRK13732 Location: 5196-5493 bp Feature: domain Description: PRK1 3732 Location: 51 96-5493 bp Feature: gene Location: 5600-5833 bp Feature: domain Description: DUF905 Location: 5630-5828 bp Feature: domain Description: DUF905 Location: 5630-5828 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006), TnpB_IS66 (pfam05717)