myRT

myRT report for GCA_000713415.1_ASM71341v1

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Seq: JORX01000089.1 (46530 bp)
Overview 1 RT 1: 40686-45771 bp Neighborhood of RT #1 [40686, 45800] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 Feature: gene Location: 40686-40919 bp Feature: domain Description: DUF905 Location: 40716-40914 bp Feature: domain Description: DUF905 Location: 4071 6-4091 4 bp Feature: gene Location: 40976-41341 bp Feature: domain Description: PRK13732 Location: 40979-41291 bp Feature: domain Description: PRK1 3732 Location: 40979-41 291 bp Feature: gene Location: 41536-43437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41803-42634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 803-42634 bp Feature: domain Description: Intron_maturas2 Location: 42748-43006 bp Feature: domain Description: Intron_maturas2 Location: 42748-43006 bp Feature: domain Description: HNHc Note: nucleases Location: 43180-43342 bp Feature: domain Description: HNHc Note: nucleases Location: 431 80-43342 bp Feature: gene Location: 43862-45433 bp Feature: domain Description: LZ_Tnp_IS66 Location: 44000-44225 bp Feature: domain Description: LZ_Tnp_IS66 Location: 44000-44225 bp Feature: domain Description: zf-IS66 Location: 44246-44378 bp Feature: domain Description: zf-IS66 Location: 44246-44378 bp Feature: domain Description: DDE_Tnp_IS66 Location: 44423-45278 bp Feature: domain Description: DDE_Tnp_IS66 Location: 44423-45278 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 45299-45410 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 45299-4541 0 bp Feature: gene Location: 45453-45800 bp Feature: domain Description: TnpB_IS66 Location: 45480-45771 bp Feature: domain Description: TnpB_IS66 Location: 45480-45771 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717)