myRT

myRT report for GCA_000713525.1_ASM71352v1

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Seq: JOSD01000004.1 (90036 bp)
Overview 1 RT 1: 71615-79214 bp Neighborhood of RT #1 [71615, 79276] HTH_38 Tra8 PHA02517 RVT-GII RVT-GII GIIM HsdM RMtype1_S_HinAWORF1578P-TRD2-CR2_like RMtype1_S_HinAWORF1578P-TRD2-CR2_like Feature: gene Location: 71615-72766 bp Ori: KEN48349.1 Feature: domain Description: HTH_38 Location: 71624-71738 bp Feature: domain Description: HTH_38 Location: 71 624-71 738 bp Feature: domain Description: Tra8 Location: 71774-72755 bp Feature: domain Description: Tra8 Location: 71 774-72755 bp Feature: gene Location: 73028-73267 bp Ori: KEN48411.1 Feature: domain Description: PHA02517 Location: 73031-73202 bp Feature: domain Description: PHA0251 7 Location: 73031 -73202 bp Feature: gene Location: 73874-74623 bp Ori: KEN48334.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74132-74588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 741 32-74588 bp Feature: gene Location: 74687-75382 bp Ori: KEN48370.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74693-74864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74693-74864 bp Feature: domain Description: GIIM Note: maturase Location: 74939-75158 bp Feature: domain Description: GIIM Note: maturase Location: 74939-751 58 bp Feature: gene Location: 76183-77892 bp Ori: KEN48397.1 Feature: domain Description: HsdM Location: 76204-77875 bp Feature: domain Description: HsdM Location: 76204-77875 bp Feature: gene Location: 77882-79276 bp Ori: KEN48373.1 Feature: domain Description: RMtype1_S_HinAWORF1578P-TRD2-CR2_like Location: 77906-78455 bp Feature: domain Description: RMtype1 _S_HinAWORF1 578P-TRD2-CR2_like Location: 77906-78455 bp Feature: domain Description: RMtype1_S_HinAWORF1578P-TRD2-CR2_like Location: 78854-79214 bp Feature: domain Description: RMtype1 _S_HinAWORF1 578P-TRD2-CR2_like Location: 78854-7921 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HsdM (COG0286), RMtype1_S_HinAWORF1578P-TRD2-CR2_like (cd17516)