myRT

myRT report for GCA_000713575.1_ASM71357v1

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Seq: JOSF01000136.1 (32116 bp)
Overview 1 RT 1: 619-3781 bp Neighborhood of RT #1 [619, 3891] RVT-GII GIIM IS285 Feature: gene Location: 619-2127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 877-1609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 877-1 609 bp Feature: domain Description: GIIM Note: maturase Location: 1684-1882 bp Feature: domain Description: GIIM Note: maturase Location: 1 684-1 882 bp Feature: gene Location: 2322-2456 bp Feature: gene Location: 2593-3891 bp Feature: domain Description: IS285 Location: 2623-3781 bp Feature: domain Description: IS285 Location: 2623-3781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), RVT-GII, GIIM (pfam08388)

Seq: JOSF01000048.1 (2496 bp)
Overview 1 RT 1: 619-2496 bp Neighborhood of RT #1 [619, 2496] RVT-GII GIIM PHA02517 Feature: gene Location: 619-2127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 877-1609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 877-1609 bp Feature: domain Description: GIIM Note: maturase Location: 1684-1882 bp Feature: domain Description: GIIM Note: maturase Location: 1684-1882 bp Feature: gene Location: 2244-2496 bp Feature: domain Description: PHA02517 Location: 2247-2496 bp Feature: domain Description: PHA02 517 Location: 2 2 47-2 496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JOSF01000097.1 (2956 bp)
Overview 1 RT 1: 4-2628 bp Neighborhood of RT #1 [4, 2873] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 4-279 bp Feature: domain Description: InsE Location: 46-277 bp Feature: domain Description: InsE Location: 46-277 bp Feature: gene Location: 279-758 bp Feature: domain Description: PHA02517 Location: 339-693 bp Feature: domain Description: PHA02517 Location: 3 3 9-693 bp Feature: gene Location: 1365-2873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1623-2355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1623 -23 55 bp Feature: domain Description: GIIM Note: maturase Location: 2430-2628 bp Feature: domain Description: GIIM Note: maturase Location: 243 0-2628 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: JOSF01000049.1 (3044 bp)
Overview 1 RT 1: 41-2716 bp Neighborhood of RT #1 [41, 2961] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 41-367 bp Feature: domain Description: InsE Location: 44-365 bp Feature: domain Description: InsE Location: 4 4 -365 bp Feature: gene Location: 367-846 bp Feature: domain Description: PHA02517 Location: 427-781 bp Feature: domain Description: PHA02517 Location: 4 27-781 bp Feature: gene Location: 1453-2961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1711-2443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1711-24 4 3 bp Feature: domain Description: GIIM Note: maturase Location: 2518-2716 bp Feature: domain Description: GIIM Note: maturase Location: 2518-2716 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: JOSF01000022.1 (3436 bp)
Overview 1 RT 1: 413-3108 bp Neighborhood of RT #1 [413, 3353] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 413-739 bp Feature: domain Description: InsE Location: 416-737 bp Feature: domain Description: InsE Location: 416-737 bp Feature: gene Location: 831-1238 bp Feature: domain Description: PHA02517 Location: 837-1173 bp Feature: domain Description: PHA025 17 Location: 837-1173 bp Feature: gene Location: 1845-3353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2103-2835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2103-2835 bp Feature: domain Description: GIIM Note: maturase Location: 2910-3108 bp Feature: domain Description: GIIM Note: maturase Location: 2910-3108 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JOSF01000058.1 (1689 bp)
Overview 1 RT 1: 1-1057 bp Neighborhood of RT #1 [1, 1497] Rve RVT-Retrons Feature: gene Location: 1-559 bp Feature: domain Description: Rve Location: 4-550 bp Feature: domain Description: Rve Location: 4-550 bp Feature: gene Location: 536-745 bp Feature: gene Location: 745-1497 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 751-1057 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 751-1057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-Retrons

Seq: JOSF01000026.1 (4277 bp)
Overview 1 RT 1: 919-3414 bp Neighborhood of RT #1 [919, 3659] PHA02517 RVT-GII GIIM Feature: gene Location: 919-1545 bp Feature: gene Location: 1588-2034 bp Feature: domain Description: PHA02517 Location: 1591-2032 bp Feature: domain Description: PHA02517 Location: 1591-2032 bp Feature: gene Location: 2151-3659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2409-3141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2409-3141 bp Feature: domain Description: GIIM Note: maturase Location: 3216-3414 bp Feature: domain Description: GIIM Note: maturase Location: 3216-3414 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JOSF01000033.1 (3576 bp)
Overview 1 RT 1: 1-3248 bp Neighborhood of RT #1 [1, 3493] mhpA PHA02517 RVT-GII GIIM Feature: gene Location: 1-863 bp Feature: domain Description: mhpA Location: 7-862 bp Feature: domain Description: mhpA Location: 7-8 62 bp Feature: gene Location: 953-1378 bp Feature: domain Description: PHA02517 Location: 977-1313 bp Feature: domain Description: PHA02517 Location: 977-1313 bp Feature: gene Location: 1985-3493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2243-2975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2243-2975 bp Feature: domain Description: GIIM Note: maturase Location: 3050-3248 bp Feature: domain Description: GIIM Note: maturase Location: 3050-3248 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT mhpA (PRK06183), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JOSF01000142.1 (29807 bp)
Overview 1 RT 1: 21567-26167 bp Neighborhood of RT #1 [21567, 26172] RVT-GII RVT-GII GIIM LacI PBP1_GntR Feature: gene Location: 21567-21911 bp Feature: gene Location: 22121-22447 bp Feature: gene Location: 23356-23790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23548-23764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23548-23764 bp Feature: gene Location: 23808-24614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23811-24174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23811-24174 bp Feature: domain Description: GIIM Note: maturase Location: 24222-24444 bp Feature: domain Description: GIIM Note: maturase Location: 24222-24444 bp Feature: gene Location: 24922-25059 bp Feature: gene Location: 25141-26172 bp Feature: domain Description: LacI Location: 25183-25318 bp Feature: domain Description: LacI Location: 25183-25318 bp Feature: domain Description: PBP1_GntR Location: 25357-26167 bp Feature: domain Description: PBP1_GntR Location: 25357-26167 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), LacI (pfam00356), PBP1_GntR (cd01575)