myRT

myRT report for GCA_000714025.1_ASM71402v1

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Seq: JOQJ01000052.1 (25714 bp)
Overview 1 RT 1: 366-2088 bp 2 RT 2: 23246-25125 bp Neighborhood of RT #1 [366, 2088] RVT-GII GIIM PHA02517 Neighborhood of RT #2 [23246, 25349] PRK13719 PHA02517 RVT-GII GIIM Feature: gene Location: 366-1199 bp Ori: KEL11020.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372-681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372-681 bp Feature: domain Description: GIIM Note: maturase Location: 756-975 bp Feature: domain Description: GIIM Note: maturase Location: 756-975 bp Feature: gene Location: 1374-1760 bp Ori: KEL11028.1 Feature: domain Description: PHA02517 Location: 1377-1758 bp Feature: domain Description: PHA0251 7 Location: 1 377-1 758 bp Feature: gene Location: 1864-2088 bp Feature: gene Location: 23246-23950 bp Ori: KEL11022.1 Feature: domain Description: PRK13719 Location: 23249-23825 bp Feature: domain Description: PRK1 371 9 Location: 23249-23825 bp Feature: gene Location: 23953-24399 bp Ori: KEL11044.1 Feature: domain Description: PHA02517 Location: 23956-24397 bp Feature: domain Description: PHA0251 7 Location: 23956-24397 bp Feature: gene Location: 24516-25349 bp Ori: KEL11014.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24522-24831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24522-24831 bp Feature: domain Description: GIIM Note: maturase Location: 24906-25125 bp Feature: domain Description: GIIM Note: maturase Location: 24906-251 25 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), PRK13719 (conjugal transfer transcriptional regulator TraJ; Provisional)

Seq: JOQJ01000071.1 (13514 bp)
Overview 1 RT 1: 11268-12925 bp Neighborhood of RT #1 [11268, 13149] Phage_holin_2_1 PHA02517 RVT-GII GIIM Feature: gene Location: 11268-11474 bp Ori: KEL07902.1 Feature: domain Description: Phage_holin_2_1 Location: 11274-11460 bp Feature: domain Description: Phage_holin_2 _1 Location: 112 74-11460 bp Feature: gene Location: 11753-12199 bp Ori: KEL07898.1 Feature: domain Description: PHA02517 Location: 11756-12197 bp Feature: domain Description: PHA02 517 Location: 11756-12 197 bp Feature: gene Location: 12316-13149 bp Ori: KEL07899.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12322-12631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 32 2 -12 631 bp Feature: domain Description: GIIM Note: maturase Location: 12706-12925 bp Feature: domain Description: GIIM Note: maturase Location: 12 706-12 92 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_holin_2_1 (pfam04971), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JOQJ01000132.1 (1895 bp)
Overview 1 RT 1: 69-1869 bp Neighborhood of RT #1 [69, 1895] PHA02517 RVT-GII Feature: gene Location: 69-548 bp Ori: KEL05214.1 Feature: domain Description: PHA02517 Location: 129-483 bp Feature: domain Description: PHA02517 Location: 129-483 bp Feature: gene Location: 1155-1895 bp Ori: KEL05215.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1413-1869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1413 -1869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: JOQJ01000138.1 (1625 bp)
Overview 1 RT 1: 58-1625 bp Neighborhood of RT #1 [58, 1625] InsG RVT-GII Feature: gene Location: 58-1170 bp Ori: KEL05139.1 Feature: domain Description: InsG Location: 61-1099 bp Feature: domain Description: InsG Location: 61-1099 bp Feature: gene Location: 1379-1625 bp Ori: KEL05140.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1475-1625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 75-1625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsG (COG3385), RVT-GII

Seq: JOQJ01000073.1 (12115 bp)
Overview 1 RT 1: 366-4216 bp Neighborhood of RT #1 [366, 4218] RVT-GII GIIM PHA02517 TonB-siderophor Feature: gene Location: 366-1199 bp Ori: KEL07664.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372-681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372-681 bp Feature: domain Description: GIIM Note: maturase Location: 756-975 bp Feature: domain Description: GIIM Note: maturase Location: 75 6-975 bp Feature: gene Location: 1316-1762 bp Ori: KEL07663.1 Feature: domain Description: PHA02517 Location: 1319-1760 bp Feature: domain Description: PHA025 17 Location: 1319-1760 bp Feature: gene Location: 2020-4218 bp Ori: KEL07658.1 Feature: domain Description: TonB-siderophor Location: 2155-4216 bp Feature: domain Description: TonB-siderophor Location: 215 5 -4216 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), TonB-siderophor (TIGR01783)

Seq: JOQJ01000139.1 (1609 bp)
Overview 1 RT 1: 1-1381 bp Neighborhood of RT #1 [1, 1452] RVT-GII InsG Feature: gene Location: 1-247 bp Ori: KEL05132.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97-247 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97-247 bp Feature: gene Location: 340-1452 bp Ori: KEL05133.1 Feature: domain Description: InsG Location: 343-1381 bp Feature: domain Description: InsG Location: 343-1381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, InsG (COG3385)

Seq: JOQJ01000002.1 (202169 bp)
Overview 1 RT 1: 366-2237 bp Neighborhood of RT #1 [366, 2237] RVT-GII GIIM PHA02517 Feature: gene Location: 366-1199 bp Ori: KEL19541.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372-681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37 2-681 bp Feature: domain Description: GIIM Note: maturase Location: 756-975 bp Feature: domain Description: GIIM Note: maturase Location: 7 56-97 5 bp Feature: gene Location: 1297-1761 bp Ori: KEL19511.1 Feature: domain Description: PHA02517 Location: 1306-1759 bp Feature: domain Description: PHA02517 Location: 1306-17 59 bp Feature: gene Location: 2040-2237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JOQJ01000019.1 (86726 bp)
Overview 1 RT 1: 366-2542 bp Neighborhood of RT #1 [366, 2544] RVT-GII GIIM PHA02517 PRK09692 Feature: gene Location: 366-1199 bp Ori: KEL17227.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372-681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 372-68 1 bp Feature: domain Description: GIIM Note: maturase Location: 756-975 bp Feature: domain Description: GIIM Note: maturase Location: 756-975 bp Feature: gene Location: 1316-1762 bp Ori: KEL17200.1 Feature: domain Description: PHA02517 Location: 1319-1760 bp Feature: domain Description: PHA02517 Location: 1319-1760 bp Feature: gene Location: 1993-2544 bp Ori: KEL17240.1 Feature: domain Description: PRK09692 Location: 1999-2542 bp Feature: domain Description: PRK09692 Location: 1999-2542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), PRK09692 (Integrase; provisional)