myRT

myRT report for GCA_000714095.1_ASM71409v1

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Seq: JOQM01000114.1 (5389 bp)
Overview 1 RT 1: 2431-5052 bp Neighborhood of RT #1 [2431, 5297] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 2431-2757 bp Ori: KEL20815.1 Feature: domain Description: InsE Location: 2443-2707 bp Feature: domain Description: InsE Location: 2443-2707 bp Feature: gene Location: 2757-3182 bp Ori: KEL20816.1 Feature: domain Description: PHA02517 Location: 2778-3117 bp Feature: domain Description: PHA0251 7 Location: 2778-31 1 7 bp Feature: gene Location: 3789-5297 bp Ori: KEL20817.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4047-4779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4047-4779 bp Feature: domain Description: GIIM Note: maturase Location: 4854-5052 bp Feature: domain Description: GIIM Note: maturase Location: 4854-5052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JOQM01000094.1 (10246 bp)
Overview 1 RT 1: 672-7986 bp Neighborhood of RT #1 [672, 8381] RVT-GII GIIM PHA02517 DUF4011 DEXXQc_SF1 SF1_C_Upf1 MTES_1575 Feature: gene Location: 672-2180 bp Ori: KEL21898.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: gene Location: 2303-2719 bp Ori: KEL21899.1 Feature: domain Description: PHA02517 Location: 2306-2711 bp Feature: domain Description: PHA02 517 Location: 2 306-2 711 bp Feature: gene Location: 2940-8381 bp Ori: KEL21900.1 Feature: domain Description: DUF4011 Location: 3237-3570 bp Feature: domain Description: DUF4011 Location: 32 37-3570 bp Feature: domain Description: DEXXQc_SF1 Location: 3927-7029 bp Feature: domain Description: DEXXQc_SF1 Location: 392 7-702 9 bp Feature: domain Description: SF1_C_Upf1 Location: 7038-7566 bp Feature: domain Description: SF1_C_Upf1 Location: 7038-7566 bp Feature: domain Description: MTES_1575 Location: 7695-7986 bp Feature: domain Description: MTES_1575 Location: 7695-7986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), SF1_C_Upf1 (cd18808), MTES_1575 (pfam18741)

Seq: JOQM01000011.1 (112435 bp)
Overview 1 RT 1: 104311-109132 bp Neighborhood of RT #1 [104311, 109143] PRK10739 PRK10472 RVT_N RVT-GII GIIM HNHc ArdA Feature: gene Location: 104311-104904 bp Ori: KEL34322.1 Feature: domain Description: PRK10739 Location: 104314-104899 bp Feature: domain Description: PRK1073 9 Location: 1043 14-104899 bp Feature: gene Location: 104961-106082 bp Ori: KEL34323.1 Gene: gntU Feature: domain Description: PRK10472 Location: 104964-106077 bp Feature: domain Description: PRK10472 Location: 104964-106077 bp Feature: gene Location: 106719-108386 bp Ori: KEL34324.1 Feature: domain Description: RVT_N Location: 106767-107004 bp Feature: domain Description: RVT_N Location: 106767-107004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107055-107697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107055-107697 bp Feature: domain Description: GIIM Note: maturase Location: 107748-107982 bp Feature: domain Description: GIIM Note: maturase Location: 107748-107982 bp Feature: domain Description: HNHc Note: nucleases Location: 108192-108351 bp Feature: domain Description: HNHc Note: nucleases Location: 108192-1083 51 bp Feature: gene Location: 108516-108659 bp Feature: gene Location: 108643-109143 bp Ori: KEL34326.1 Feature: domain Description: ArdA Location: 108667-109132 bp Feature: domain Description: ArdA Location: 108667-10913 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10739 (YhgN family NAAT transporter), PRK10472 (low affinity gluconate transporter; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), ArdA (pfam07275)

Seq: JOQM01000019.1 (72649 bp)
Overview 1 RT 1: 797-6821 bp Neighborhood of RT #1 [797, 6821] Psu RVT-UG5 nitrilase PRK09692 Feature: gene Location: 797-1186 bp Ori: KEL33409.1 Feature: domain Description: Psu Location: 800-1169 bp Feature: domain Description: Psu Location: 800-1169 bp Feature: gene Location: 1388-2077 bp Feature: gene Location: 2074-4950 bp Ori: KEL33411.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2548-3076 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 254 8-3076 bp Feature: domain Description: nitrilase Location: 4288-4870 bp Feature: domain Description: nitrilase Location: 4 288-4 870 bp Feature: gene Location: 5043-6299 bp Ori: KEL33412.1 Feature: domain Description: PRK09692 Location: 5052-6255 bp Feature: domain Description: PRK09692 Location: 5052-6255 bp Feature: gene Location: 6693-6821 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), RVT-UG5, nitrilase (cl11424), PRK09692 (Integrase; provisional)