myRT

myRT report for GCA_000714815.1_Anditalea_andensis_genome

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Seq: JMIH01000011.1 Anditalea andensis strain LY1 Contig_11, whole genome shotgun sequence (181766 bp)
Overview 1 RT 1: 37728-41014 bp Neighborhood of RT #1 [37728, 41025] AraC DinB RVT-UNC HxlR Feature: gene Location: 37728-38564 bp Ori: KEO75436.1 Feature: domain Description: AraC Location: 38259-38559 bp Feature: domain Description: AraC Location: 38259-38559 bp Feature: gene Location: 38653-39156 bp Ori: KEO75437.1 Feature: domain Description: DinB Location: 38659-39130 bp Feature: domain Description: DinB Location: 38659-391 30 bp Feature: gene Location: 39700-40026 bp Ori: KEO75438.1 Feature: RT Description: RVT-UNC Note: UNC RT Location: 39910-40009 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3991 0-40009 bp Feature: gene Location: 40264-40392 bp Feature: gene Location: 40672-41025 bp Ori: KEO75440.1 Feature: domain Description: HxlR Location: 40702-41014 bp Feature: domain Description: HxlR Location: 40702-41 01 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AraC (COG2207), DinB (pfam05163), RVT-GII/RVT-UG28b/RVT-UG24(RVT-UNC), HxlR (pfam01638)

Seq: JMIH01000035.1 Anditalea andensis strain LY1 Contig_35, whole genome shotgun sequence (15093 bp)
Overview 1 RT 1: 1083-10043 bp Neighborhood of RT #1 [1083, 10043] PDDEXK_2 Transposase_20 RVT-UG8 RVT-UG3 RVT-GII GIIM CarbopepD_reg_2 Feature: gene Location: 1083-1943 bp Ori: KEO71842.1 Feature: domain Description: PDDEXK_2 Location: 1116-1806 bp Feature: domain Description: PDDEXK_2 Location: 1116-1806 bp Feature: gene Location: 2442-3542 bp Ori: KEO71843.1 Feature: domain Description: Transposase_20 Location: 2703-2955 bp Feature: domain Description: Transposase_2 0 Location: 2 703-2 955 bp Feature: gene Location: 3472-5433 bp Ori: KEO71844.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3994-4432 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3994-4432 bp Feature: gene Location: 5434-6576 bp Ori: KEO71845.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 5629-6136 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 562 9-6136 bp Feature: gene Location: 7304-8584 bp Ori: KEO71846.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7499-8114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7499-8114 bp Feature: domain Description: GIIM Note: maturase Location: 8189-8399 bp Feature: domain Description: GIIM Note: maturase Location: 8189-8399 bp Feature: gene Location: 8841-9689 bp Ori: KEO71847.1 Feature: domain Description: CarbopepD_reg_2 Location: 8919-9177 bp Feature: domain Description: CarbopepD_reg_2 Location: 8919-9177 bp Feature: gene Location: 9699-10043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_2 (pfam12784), Transposase_20 (pfam02371), RVT-UG8, RVT-UG3, RVT-GII, GIIM (pfam08388), CarbopepD_reg_2 (pfam13715)