myRT

myRT report for GCA_000714915.1_UCD_JA17_pb

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Seq: JMJA01000002.1 Escherichia coli strain UCD_JA17_pb contig_2, whole genome shotgun sequence (3034835 bp)
Overview 1 RT 1: 2476219-2479795 bp Neighborhood of RT #1 [2476219, 2479890] InsE PHA02517 RVT-GII GIIM PHA02517 DDE_3 Feature: gene Location: 2476219-2476521 bp Feature: domain Description: InsE Location: 2476228-2476510 bp Feature: domain Description: InsE Location: 2476228-247651 0 bp Feature: gene Location: 2476734-2476973 bp Feature: domain Description: PHA02517 Location: 2476737-2476908 bp Feature: domain Description: PHA0251 7 Location: 2476737-2476908 bp Feature: gene Location: 2477565-2479088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2477838-2478570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2477838-2478570 bp Feature: domain Description: GIIM Note: maturase Location: 2478645-2478843 bp Feature: domain Description: GIIM Note: maturase Location: 2478645-2478843 bp Feature: gene Location: 2479253-2479657 bp Feature: domain Description: PHA02517 Location: 2479256-2479637 bp Feature: domain Description: PHA0251 7 Location: 2479256-2479637 bp Feature: gene Location: 2479672-2479890 bp Feature: domain Description: DDE_3 Location: 2479693-2479795 bp Feature: domain Description: DDE_3 Location: 2479693-2479795 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), DDE_3 (pfam13358)