myRT

myRT report for GCA_000715915.1_ASM71591v1

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Seq: KL572240.1 Saccharopolyspora phatthalungensis strain NRRL B-24798 genomic scaffold P081_Doro1_scaffold12, whole genome shotgun sequence (91337 bp)
Overview 1 RT 1: 9329-14935 bp Neighborhood of RT #1 [9329, 14935] rve_3 RVT-GII Intron_maturas2 Transposase_mut Feature: gene Location: 9329-10153 bp Feature: gene Location: 10572-10772 bp Feature: domain Description: rve_3 Location: 10575-10692 bp Feature: domain Description: rve_3 Location: 1 0575-1 0692 bp Feature: gene Location: 11370-13145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11631-12426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 631 -1 2426 bp Feature: domain Description: Intron_maturas2 Location: 12528-12756 bp Feature: domain Description: Intron_maturas2 Location: 1 2528-1 2756 bp Feature: gene Location: 13792-14715 bp Feature: domain Description: Transposase_mut Location: 13849-14659 bp Feature: domain Description: Transposase_mut Location: 1 3849-1 4659 bp Feature: gene Location: 14804-14935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve_3 (pfam13683), RVT-GII, Intron_maturas2 (pfam01348), Transposase_mut (pfam00872)

Seq: KL572373.1 Saccharopolyspora phatthalungensis strain NRRL B-24798 genomic scaffold P081_Doro1_scaffold146, whole genome shotgun sequence (68986 bp)
Overview 1 RT 1: 65762-68902 bp Neighborhood of RT #1 [65762, 68985] Peptidase_C25 Peptidase_C25 RVT-GII GIIM Feature: gene Location: 65762-65998 bp Feature: gene Location: 66005-67519 bp Feature: domain Description: Peptidase_C25 Location: 66086-66461 bp Feature: domain Description: Peptidase_C2 5 Location: 66086-66461 bp Feature: domain Description: Peptidase_C25 Location: 66806-67133 bp Feature: domain Description: Peptidase_C2 5 Location: 66806-67133 bp Feature: gene Location: 67639-68985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67960-68599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67960-68599 bp Feature: domain Description: GIIM Note: maturase Location: 68680-68902 bp Feature: domain Description: GIIM Note: maturase Location: 68680-68902 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_C25 (pfam01364), RVT-GII, GIIM (pfam08388)

Seq: KL572385.1 Saccharopolyspora phatthalungensis strain NRRL B-24798 genomic scaffold P081_Doro1_scaffold159, whole genome shotgun sequence (24975 bp)
Overview 1 RT 1: 191-2597 bp Neighborhood of RT #1 [191, 2668] RVT-GII GIIM CoxS CoxM Feature: gene Location: 191-1561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 500-1130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 500-113 0 bp Feature: domain Description: GIIM Note: maturase Location: 1217-1424 bp Feature: domain Description: GIIM Note: maturase Location: 1217-1424 bp Feature: gene Location: 1730-2263 bp Feature: domain Description: CoxS Location: 1787-2231 bp Feature: domain Description: CoxS Location: 1787-223 1 bp Feature: gene Location: 2285-2668 bp Feature: domain Description: CoxM Location: 2288-2597 bp Feature: domain Description: CoxM Location: 2288-2597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), CoxS (COG2080), CoxM (COG1319)

Seq: KL572547.1 Saccharopolyspora phatthalungensis strain NRRL B-24798 genomic scaffold P081_Doro1_scaffold330, whole genome shotgun sequence (4056 bp)
Overview 1 RT 1: 87-4054 bp Neighborhood of RT #1 [87, 4054] RVT-GII GIIM RVT-GII GIIM Feature: gene Location: 87-1346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303-960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 303-960 bp Feature: domain Description: GIIM Note: maturase Location: 1038-1254 bp Feature: domain Description: GIIM Note: maturase Location: 1038-1254 bp Feature: gene Location: 1709-3025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2012-2633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2012-2633 bp Feature: domain Description: GIIM Note: maturase Location: 2711-2921 bp Feature: domain Description: GIIM Note: maturase Location: 2711-2921 bp Feature: gene Location: 2477-4054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JNYW01004085.1 Saccharopolyspora phatthalungensis strain NRRL B-24798 contig402.1, whole genome shotgun sequence (1551 bp)
Overview 1 RT 1: 1-1083 bp Neighborhood of RT #1 [1, 1127] YigB RVT-UNC Feature: gene Location: 1-399 bp Feature: domain Description: YigB Location: 4-385 bp Feature: domain Description: YigB Location: 4-385 bp Feature: gene Location: 858-1127 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 882-1083 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 882-1083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YigB (COG1011), RVT-GII/RVT-CRISPR(RVT-UNC)

Seq: JNYW01004104.1 Saccharopolyspora phatthalungensis strain NRRL B-24798 contig408.1, whole genome shotgun sequence (1486 bp)
Overview 1 RT 1: 157-1327 bp Neighborhood of RT #1 [157, 1401] RVT-GII GIIM Feature: gene Location: 157-1401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 373-1024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 373-1024 bp Feature: domain Description: GIIM Note: maturase Location: 1108-1327 bp Feature: domain Description: GIIM Note: maturase Location: 1108-1327 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: KL572622.1 Saccharopolyspora phatthalungensis strain NRRL B-24798 genomic scaffold P081_Doro1_scaffold417, whole genome shotgun sequence (2454 bp)
Overview 1 RT 1: 611-2135 bp Neighborhood of RT #1 [611, 2332] RVT-GII GIIM Feature: gene Location: 611-1696 bp Feature: gene Location: 1004-2332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1007-1829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1007 -1829 bp Feature: domain Description: GIIM Note: maturase Location: 1907-2135 bp Feature: domain Description: GIIM Note: maturase Location: 1907 -2135 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: KL572625.1 Saccharopolyspora phatthalungensis strain NRRL B-24798 genomic scaffold P081_Doro1_scaffold421, whole genome shotgun sequence (2178 bp)
Overview 1 RT 1: 100-2098 bp Neighborhood of RT #1 [100, 2098] RVT-GII GIIM Feature: gene Location: 100-1380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334-994 bp Feature: domain Description: GIIM Note: maturase Location: 1075-1306 bp Feature: domain Description: GIIM Note: maturase Location: 1075-1306 bp Feature: gene Location: 1949-2098 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JNYW01004164.1 Saccharopolyspora phatthalungensis strain NRRL B-24798 contig426.1, whole genome shotgun sequence (1277 bp)
Overview 1 RT 1: 159-1094 bp Neighborhood of RT #1 [159, 1108] RVT-UNC Feature: gene Location: 159-485 bp Feature: gene Location: 693-911 bp Feature: gene Location: 908-1108 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 950-1094 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 9 50-109 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII/RVT-CRISPR(RVT-UNC)