myRT

myRT report for GCA_000716195.1_ASM71619v1

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Seq: KL575241.1 Streptomyces sp. NRRL S-50 genomic scaffold P183_Doro1_scaffold1, whole genome shotgun sequence (272082 bp)
Overview 1 RT 1: 199862-204921 bp Neighborhood of RT #1 [199862, 205088] RVT-UG23 Lant_dehydr_N Lant_dehydr_N Feature: gene Location: 199862-200242 bp Feature: gene Location: 200658-201023 bp Feature: gene Location: 201136-202767 bp Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 201460-202057 bp Feature: RT Description: RVT-UG23 Note: UG23 RT Location: 201 460-202057 bp Feature: gene Location: 203719-203940 bp Feature: gene Location: 204264-205088 bp Feature: domain Description: Lant_dehydr_N Location: 204327-204582 bp Feature: domain Description: Lant_dehydr_N Location: 204327-204582 bp Feature: domain Description: Lant_dehydr_N Location: 204699-204921 bp Feature: domain Description: Lant_dehydr_N Location: 204699-204921 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG23, Lant_dehydr_N (pfam04738)

Seq: KL575249.1 Streptomyces sp. NRRL S-50 genomic scaffold P183_Doro1_scaffold9, whole genome shotgun sequence (157942 bp)
Overview 1 RT 1: 6277-11488 bp Neighborhood of RT #1 [6277, 11580] DDE_Tnp_1_assoc RVT-GII UbiH Feature: gene Location: 6277-6918 bp Feature: gene Location: 7259-7747 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 7262-7526 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 72 62 -752 6 bp Feature: gene Location: 7902-8837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7911-8574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7911-8574 bp Feature: gene Location: 9766-10161 bp Feature: gene Location: 10444-11580 bp Feature: domain Description: UbiH Location: 10447-11488 bp Feature: domain Description: UbiH Location: 10447-11488 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_assoc (pfam13808), RVT-GII, UbiH (TIGR01984)

Seq: KL575271.1 Streptomyces sp. NRRL S-50 genomic scaffold P183_Doro1_scaffold31, whole genome shotgun sequence (83229 bp)
Overview 1 RT 1: 53104-59107 bp Neighborhood of RT #1 [53104, 59107] INT_ICEBs1_C_like RVT_N RVT-GII GIIM HNH Feature: gene Location: 53104-53745 bp Feature: domain Description: INT_ICEBs1_C_like Location: 53110-53575 bp Feature: domain Description: INT_ICEBs1_C_like Location: 53 110-53 575 bp Feature: gene Location: 53780-53992 bp Feature: gene Location: 54925-56697 bp Feature: domain Description: RVT_N Location: 54997-55237 bp Feature: domain Description: RVT_N Location: 54997-5523 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55294-55951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55294-55951 bp Feature: domain Description: GIIM Note: maturase Location: 56011-56239 bp Feature: domain Description: GIIM Note: maturase Location: 56011-5623 9 bp Feature: domain Description: HNH Note: nucleases Location: 56563-56665 bp Feature: domain Description: HNH Note: nucleases Location: 56563 -56665 bp Feature: gene Location: 57891-58769 bp Feature: gene Location: 58889-59107 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: KL575381.1 Streptomyces sp. NRRL S-50 genomic scaffold P183_Doro1_scaffold146, whole genome shotgun sequence (7359 bp)
Overview 1 RT 1: 1062-4595 bp Neighborhood of RT #1 [1062, 4595] DUF4096 RVT-GII GIIM Feature: gene Location: 1062-1466 bp Feature: gene Location: 1490-2065 bp Feature: domain Description: DUF4096 Location: 1619-1850 bp Feature: domain Description: DUF4 096 Location: 1619-1850 bp Feature: gene Location: 2312-3397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2468-3107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24 68-3107 bp Feature: domain Description: GIIM Note: maturase Location: 3191-3380 bp Feature: domain Description: GIIM Note: maturase Location: 3191-3380 bp Feature: gene Location: 3427-3930 bp Feature: gene Location: 4239-4595 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4096 (pfam13340), RVT-GII, GIIM (pfam08388)

Seq: KL575395.1 Streptomyces sp. NRRL S-50 genomic scaffold P183_Doro1_scaffold162, whole genome shotgun sequence (7222 bp)
Overview 1 RT 1: 3-3010 bp Neighborhood of RT #1 [3, 3010] GT4_PimA-like RVT-G2Lb Feature: gene Location: 3-998 bp Feature: domain Description: GT4_PimA-like Location: 228-972 bp Feature: domain Description: GT4_PimA-like Location: 228-972 bp Feature: gene Location: 1777-2181 bp Feature: RT Description: RVT-G2Lb Note: G2Lb RT Location: 1780-2143 bp Feature: RT Description: RVT-G2Lb Note: G2Lb RT Location: 1780-2143 bp Feature: gene Location: 2464-2889 bp Feature: gene Location: 2684-3010 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT4_PimA-like (cd03801), RVT-G2Lb

Seq: JOAV01003573.1 Streptomyces sp. NRRL S-50 contig441.1, whole genome shotgun sequence (333 bp)
Overview 1 RT 1: 1-328 bp Neighborhood of RT #1 [1, 330] RVT-GII Feature: gene Location: 1-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163-328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16 3-328 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII