myRT

myRT report for GCA_000716895.1_ASM71689v1

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Seq: JNWS01000025.1 Rhodococcus rhodochrous strain NRRL B-1306 contig25.1, whole genome shotgun sequence (87094 bp)
Overview 1 RT 1: 43533-47787 bp Neighborhood of RT #1 [43533, 47846] AcrR RVT-Retrons PBP2_DszB PRK06557 Feature: gene Location: 43533-44192 bp Feature: domain Description: AcrR Location: 43566-44142 bp Feature: domain Description: AcrR Location: 43566-441 42 bp Feature: gene Location: 44467-44649 bp Feature: gene Location: 44660-45928 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 45071-45677 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 45071 -45677 bp Feature: gene Location: 46156-47097 bp Feature: domain Description: PBP2_DszB Location: 46159-46906 bp Feature: domain Description: PBP2_DszB Location: 461 59-46906 bp Feature: gene Location: 47139-47846 bp Feature: domain Description: PRK06557 Location: 47187-47787 bp Feature: domain Description: PRK06557 Location: 471 87-47787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), RVT-Retrons, PBP2_DszB (cd13554), PRK06557 (L-ribulose-5-phosphate 4-epimerase; Validated)

Seq: JNWS01000028.1 Rhodococcus rhodochrous strain NRRL B-1306 contig28.1, whole genome shotgun sequence (43513 bp)
Overview 1 RT 1: 17337-20297 bp Neighborhood of RT #1 [17337, 20632] Tra8 RVT-GII GIIM DEDD_Tnp_IS110 Feature: gene Location: 17337-17474 bp Feature: gene Location: 17526-17927 bp Feature: domain Description: Tra8 Location: 17538-17898 bp Feature: domain Description: Tra8 Location: 17538-17898 bp Feature: gene Location: 18100-19608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18481-19165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18481-19165 bp Feature: domain Description: GIIM Note: maturase Location: 19240-19453 bp Feature: domain Description: GIIM Note: maturase Location: 192 40-19453 bp Feature: gene Location: 19985-20113 bp Feature: gene Location: 20129-20632 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 20132-20297 bp Feature: domain Description: DEDD_Tnp_IS110 Location: 2 0132 -2 02 97 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), RVT-GII, GIIM (pfam08388), DEDD_Tnp_IS110 (pfam01548)