myRT

myRT report for GCA_000716975.1_ASM71697v1

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Seq: JNXA01000017.1 Gordonia terrae strain NRRL B-16283 contig17.1, whole genome shotgun sequence (111271 bp)
Overview 1 RT 1: 428-3584 bp Neighborhood of RT #1 [428, 3607] RVT-Retrons HGbI_like pimE Feature: gene Location: 428-1699 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 863-1466 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 863-1 466 bp Feature: gene Location: 1812-2258 bp Feature: domain Description: HGbI_like Location: 1827-2193 bp Feature: domain Description: HGbI_like Location: 1 827-21 93 bp Feature: gene Location: 2309-3607 bp Feature: domain Description: pimE Location: 2372-3584 bp Feature: domain Description: pimE Location: 2372-3584 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HGbI_like, pimE (PRK13375), RVT-Retrons

Seq: JNXA01000029.1 Gordonia terrae strain NRRL B-16283 contig29.1, whole genome shotgun sequence (97399 bp)
Overview 1 RT 1: 60791-84700 bp Neighborhood of RT #1 [60791, 84759] AcrR RVT-GII GIIM PRK12467 PRK12467 PRK12467 PRK12467 PRK12467 KOG1178 EntF Feature: gene Location: 60791-61444 bp Feature: domain Description: AcrR Location: 60857-61379 bp Feature: domain Description: AcrR Location: 60857-61379 bp Feature: gene Location: 61932-62564 bp Feature: gene Location: 63586-65022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63910-64591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63910-64591 bp Feature: domain Description: GIIM Note: maturase Location: 64660-64888 bp Feature: domain Description: GIIM Note: maturase Location: 64660-64888 bp Feature: gene Location: 65375-66418 bp Feature: gene Location: 66427-84759 bp Feature: domain Description: PRK12467 Location: 66520-67510 bp Feature: domain Description: PRK12 467 Location: 6652 0-67510 bp Feature: domain Description: PRK12467 Location: 67756-74014 bp Feature: domain Description: PRK12 467 Location: 67756-74014 bp Feature: domain Description: PRK12467 Location: 74035-74248 bp Feature: domain Description: PRK12 467 Location: 74035-742 48 bp Feature: domain Description: PRK12467 Location: 74356-77479 bp Feature: domain Description: PRK12 467 Location: 74356-77479 bp Feature: domain Description: PRK12467 Location: 77515-83011 bp Feature: domain Description: PRK12 467 Location: 77515-83011 bp Feature: domain Description: KOG1178 Location: 83218-83830 bp Feature: domain Description: KOG1178 Location: 832 18-83830 bp Feature: domain Description: EntF Location: 83962-84700 bp Feature: domain Description: EntF Location: 83962 -84700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), RVT-GII, GIIM (pfam08388), PRK12467 (peptide synthase; Provisional), KOG1178 (KOG1178, Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes ), EntF (COG3319)