myRT

myRT report for GCA_000717205.1_ASM71720v1

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Seq: JNYM01000719.1 Kibdelosporangium aridum subsp. largum strain NRRL B-24462 contig41.1, whole genome shotgun sequence (9660 bp)
Overview 1 RT 1: 5400-9119 bp Neighborhood of RT #1 [5400, 9139] PRK06526 rve COG4584 zf-ISL3 RVT-GII Transposase_mut IS285 Feature: gene Location: 5400-6188 bp Feature: domain Description: PRK06526 Location: 5430-6183 bp Feature: domain Description: PRK06526 Location: 5430-61 83 bp Feature: gene Location: 6188-7183 bp Feature: domain Description: rve Location: 6269-6650 bp Feature: domain Description: rve Location: 6269-6650 bp Feature: domain Description: COG4584 Location: 6737-7043 bp Feature: domain Description: COG4584 Location: 6737-7043 bp Feature: gene Location: 7280-8428 bp Feature: domain Description: zf-ISL3 Location: 7388-7499 bp Feature: domain Description: zf-ISL3 Location: 7388-7499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7838-8228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7838-8228 bp Feature: gene Location: 8482-8907 bp Feature: domain Description: Transposase_mut Location: 8665-8887 bp Feature: domain Description: Transposase_mut Location: 8665-8887 bp Feature: gene Location: 8828-9139 bp Feature: domain Description: IS285 Location: 8945-9119 bp Feature: domain Description: IS285 Location: 8945-91 1 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06526 (transposase; Provisional), rve (pfam00665), COG4584 (Transposase ), zf-ISL3 (pfam14690), RVT-GII, Transposase_mut (pfam00872), IS285 (COG3328)

Seq: JNYM01001238.1 Kibdelosporangium aridum subsp. largum strain NRRL B-24462 contig71.33, whole genome shotgun sequence (11631 bp)
Overview 1 RT 1: 9681-11039 bp Neighborhood of RT #1 [9681, 11629] RVT-GII RVT-GII Feature: gene Location: 9681-9863 bp Feature: gene Location: 9901-10101 bp Feature: gene Location: 10251-10514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10356-10482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10356-10482 bp Feature: gene Location: 10490-11629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10496-11039 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10496-11039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JNYM01001560.1 Kibdelosporangium aridum subsp. largum strain NRRL B-24462 contig110.1, whole genome shotgun sequence (13341 bp)
Overview 1 RT 1: 2-9008 bp Neighborhood of RT #1 [2, 9010] TNT NHL_PKND_like RVT-Retrons TIGR03086 dnaE2 Feature: gene Location: 2-772 bp Feature: domain Description: TNT Location: 485-743 bp Feature: domain Description: TNT Location: 485-743 bp Feature: gene Location: 987-3272 bp Feature: domain Description: NHL_PKND_like Location: 1674-2262 bp Feature: domain Description: NHL_PKND_like Location: 1674-2262 bp Feature: gene Location: 3692-4831 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3989-4607 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 989-4607 bp Feature: gene Location: 5107-5700 bp Feature: domain Description: TIGR03086 Location: 5245-5692 bp Feature: domain Description: TIGR03 086 Location: 5245-5692 bp Feature: gene Location: 5702-9010 bp Feature: domain Description: dnaE2 Location: 5885-9008 bp Feature: domain Description: dnaE2 Location: 5885-9008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TNT (pfam14021), NHL_PKND_like (cd14952), RVT-Retrons, TIGR03086 (TIGR03086 family protein), dnaE2 (PRK05672)

Seq: JNYM01001699.1 Kibdelosporangium aridum subsp. largum strain NRRL B-24462 contig132.1, whole genome shotgun sequence (2278 bp)
Overview 1 RT 1: 567-1944 bp Neighborhood of RT #1 [567, 2084] RVT-GII GIIM Feature: gene Location: 567-2084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954-1650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 954 -1650 bp Feature: domain Description: GIIM Note: maturase Location: 1719-1944 bp Feature: domain Description: GIIM Note: maturase Location: 1719-194 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JNYM01001869.1 Kibdelosporangium aridum subsp. largum strain NRRL B-24462 contig157.1, whole genome shotgun sequence (7926 bp)
Overview 1 RT 1: 3045-6792 bp Neighborhood of RT #1 [3045, 6792] HTH_31 RVT-UG17 SLATT_5 Feature: gene Location: 3045-3272 bp Feature: domain Description: HTH_31 Location: 3048-3210 bp Feature: domain Description: HTH_31 Location: 3048-3210 bp Feature: gene Location: 3284-3634 bp Feature: gene Location: 3909-5276 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4146-4743 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4146-4743 bp Feature: gene Location: 5266-5922 bp Feature: domain Description: SLATT_5 Location: 5377-5911 bp Feature: domain Description: SLATT_5 Location: 5 377-5 911 bp Feature: gene Location: 6430-6792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_31 (pfam13560), RVT-UG17, SLATT_5 (pfam18160)