myRT

myRT report for GCA_000719985.1_ASM71998v1

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Seq: JOIL01000041.1 Rhodococcus erythropolis strain NRRL B-16532 contig41.1, whole genome shotgun sequence (32067 bp)
Overview 1 RT 1: 9604-14020 bp Neighborhood of RT #1 [9604, 14046] PRK06557 PBP2_DszB RVT-Retrons RidA MhpC Feature: gene Location: 9604-10317 bp Feature: domain Description: PRK06557 Location: 9655-10258 bp Feature: domain Description: PRK06557 Location: 9655-1 0258 bp Feature: gene Location: 10359-11300 bp Feature: domain Description: PBP2_DszB Location: 10362-11109 bp Feature: domain Description: PBP2_DszB Location: 1 0362-1 1 1 09 bp Feature: gene Location: 11541-12791 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11952-12558 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 952-1 2558 bp Feature: gene Location: 12805-13191 bp Feature: domain Description: RidA Location: 12841-13180 bp Feature: domain Description: RidA Location: 1 2841 -1 31 80 bp Feature: gene Location: 13234-14046 bp Feature: domain Description: MhpC Location: 13261-14020 bp Feature: domain Description: MhpC Location: 1 3261 -1 4020 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_DszB (cd13554), RVT-Retrons, RidA (COG0251), MhpC (COG0596), PRK06557 (L-ribulose-5-phosphate 4-epimerase; Validated)

Seq: JOIL01000052.1 Rhodococcus erythropolis strain NRRL B-16532 contig52.1, whole genome shotgun sequence (13732 bp)
Overview 1 RT 1: 251-4441 bp Neighborhood of RT #1 [251, 4467] IS285 RVT-GII GIIM IS285 AcrR Feature: gene Location: 251-652 bp Feature: domain Description: IS285 Location: 272-632 bp Feature: domain Description: IS2 85 Location: 2 72 -632 bp Feature: gene Location: 777-2270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1119-1800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1119-1800 bp Feature: domain Description: GIIM Note: maturase Location: 1872-2106 bp Feature: domain Description: GIIM Note: maturase Location: 1872 -2 106 bp Feature: gene Location: 2633-3634 bp Feature: domain Description: IS285 Location: 2693-3461 bp Feature: domain Description: IS2 85 Location: 2 693-3461 bp Feature: gene Location: 3820-4467 bp Feature: domain Description: AcrR Location: 3871-4441 bp Feature: domain Description: AcrR Location: 3871-4441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), AcrR (COG1309), RVT-GII, GIIM (pfam08388)