myRT

myRT report for GCA_000721075.1_ASM72107v1

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Seq: JOEQ01000023.1 Streptosporangium amethystogenes strain NRRL B-2639 contig23.1, whole genome shotgun sequence (172856 bp)
Overview 1 RT 1: 44584-53503 bp Neighborhood of RT #1 [44584, 53505] RVT-GII Big_5 Big_5 Big_5 Big_5 INT_ICEBs1_C_like PRK07238 Feature: gene Location: 44584-45189 bp Feature: gene Location: 45256-45630 bp Feature: gene Location: 45688-50598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46039-46735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46039-46735 bp Feature: domain Description: Big_5 Location: 48094-48382 bp Feature: domain Description: Big_5 Location: 48094-48382 bp Feature: domain Description: Big_5 Location: 48391-48682 bp Feature: domain Description: Big_5 Location: 48391 -48682 bp Feature: domain Description: Big_5 Location: 48691-48985 bp Feature: domain Description: Big_5 Location: 48691 -48985 bp Feature: domain Description: Big_5 Location: 48997-49288 bp Feature: domain Description: Big_5 Location: 48997-49288 bp Feature: gene Location: 51144-51383 bp Feature: domain Description: INT_ICEBs1_C_like Location: 51180-51309 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 51 1 80-51 309 bp Feature: gene Location: 52171-53505 bp Feature: domain Description: PRK07238 Location: 52183-53503 bp Feature: domain Description: PRK07238 Location: 521 83-53503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Big_5 (pfam13205), INT_ICEBs1_C_like (cd01189), PRK07238 (bifunctional RNase H/acid phosphatase; Provisional)

Seq: JOEQ01000078.1 Streptosporangium amethystogenes strain NRRL B-2639 contig78.1, whole genome shotgun sequence (8294 bp)
Overview 1 RT 1: 1619-5400 bp Neighborhood of RT #1 [1619, 5400] DDE_Tnp_Tn3 RVT-GII GIIM DDE_Tnp_Tn3 Feature: gene Location: 1619-2134 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 1802-2057 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 1802 -2 057 bp Feature: gene Location: 2310-2471 bp Feature: gene Location: 2649-4130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2991-3678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 991-3678 bp Feature: domain Description: GIIM Note: maturase Location: 3750-3969 bp Feature: domain Description: GIIM Note: maturase Location: 3750-3969 bp Feature: gene Location: 4268-4795 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 4274-4568 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 42 74-4568 bp Feature: gene Location: 4873-5400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_Tn3 (pfam01526), RVT-GII, GIIM (pfam08388)

Seq: JOEQ01000106.1 Streptosporangium amethystogenes strain NRRL B-2639 contig106.1, whole genome shotgun sequence (1921 bp)
Overview 1 RT 1: 59-1247 bp Neighborhood of RT #1 [59, 1321] RVT-GII GIIM Feature: gene Location: 59-1321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275-935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 275-93 5 bp Feature: domain Description: GIIM Note: maturase Location: 1016-1247 bp Feature: domain Description: GIIM Note: maturase Location: 1016-1247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)