myRT

myRT report for GCA_000722995.1_Meg1v1

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Seq: JGVH01000090.1 Photorhabdus temperata subsp. temperata Meg1 MEG1DRAFT_contig_89.90, whole genome shotgun sequence (20274 bp)
Overview 1 RT 1: 14548-19643 bp Neighborhood of RT #1 [14548, 19702] INT_RitB_C_like Phage_int_SAM_1 INT_RitC_C_like RVT-GII DUF772 GT4_WavL-like Feature: gene Location: 14548-15522 bp Feature: domain Description: INT_RitB_C_like Location: 14875-15463 bp Feature: domain Description: INT_RitB_C_like Location: 1 4875-1 5463 bp Feature: gene Location: 15509-16519 bp Feature: domain Description: Phage_int_SAM_1 Location: 15551-15794 bp Feature: domain Description: Phage_int_SAM_1 Location: 1 5551 -1 5794 bp Feature: domain Description: INT_RitC_C_like Location: 15887-16439 bp Feature: domain Description: INT_RitC_C_like Location: 1 5887-1 6439 bp Feature: gene Location: 16603-17307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16888-17275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6888-1 7275 bp Feature: gene Location: 17884-18246 bp Feature: domain Description: DUF772 Location: 17887-18055 bp Feature: domain Description: DUF772 Location: 1 7887-1 8055 bp Feature: gene Location: 18605-19702 bp Feature: domain Description: GT4_WavL-like Location: 18635-19643 bp Feature: domain Description: GT4_WavL-like Location: 1 8635-1 9643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitB_C_like (cd00797), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), RVT-GII, DUF772 (pfam05598), GT4_WavL-like (cd03819)

Seq: JGVH01000001.1 Photorhabdus temperata subsp. temperata Meg1 MEG1DRAFT_contig_0.1, whole genome shotgun sequence (215348 bp)
Overview 1 RT 1: 182205-185237 bp Neighborhood of RT #1 [182205, 185290] RVT-GII DDE_Tnp_Tn3 Feature: gene Location: 182205-182423 bp Feature: gene Location: 182435-182995 bp Feature: gene Location: 183618-184313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183624-184071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18362 4-184071 bp Feature: gene Location: 184310-184564 bp Feature: gene Location: 185063-185290 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 185072-185237 bp Feature: domain Description: DDE_Tnp_Tn3 Location: 185072 -1852 37 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_Tn3 (pfam01526)