myRT

myRT report for GCA_000731125.1_ASM73112v1

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Seq: JNGC01000001.1 Pantoea agglomerans strain 190 contig1, whole genome shotgun sequence (3393498 bp)
Overview 1 RT 1: 797886-805172 bp 2 RT 2: 2081454-2085282 bp Neighborhood of RT #1 [797886, 805174] PRK10792 DUF1198 RVT-Retrons COG3950 PRK13605 Neighborhood of RT #2 [2081454, 2085282] Phage_tail_S RVT-Retrons W Feature: gene Location: 797886-798752 bp Ori: KEY42295.1 Feature: domain Description: PRK10792 Location: 797889-798738 bp Feature: domain Description: PRK1 0792 Location: 797889-798738 bp Feature: gene Location: 798938-799429 bp Ori: KEY42296.1 Feature: domain Description: DUF1198 Location: 798941-799352 bp Feature: domain Description: DUF1 1 98 Location: 798941 -799352 bp Feature: gene Location: 800876-801814 bp Ori: KEY42297.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 800975-801572 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 800975-801 572 bp Feature: gene Location: 801818-803443 bp Ori: KEY42298.1 Feature: domain Description: COG3950 Location: 801998-803168 bp Feature: domain Description: COG3950 Location: 801 998-8031 68 bp Feature: gene Location: 804848-805174 bp Ori: KEY42299.1 Feature: domain Description: PRK13605 Location: 804851-805172 bp Feature: domain Description: PRK1 3605 Location: 804851 -8051 72 bp Feature: gene Location: 2081454-2081597 bp Ori: KEY43572.1 Feature: domain Description: Phage_tail_S Location: 2081460-2081583 bp Feature: domain Description: Phage_tail_S Location: 2081 460-2081 583 bp Feature: gene Location: 2081832-2082770 bp Feature: gene Location: 2082767-2083714 bp Ori: KEY43574.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2082866-2083460 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2082866-2083460 bp Feature: gene Location: 2084340-2084537 bp Ori: KEY43575.1 Feature: domain Description: W Location: 2084346-2084514 bp Feature: domain Description: W Location: 2084346-208451 4 bp Feature: gene Location: 2084842-2085282 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10792 (bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD), DUF1198 (pfam06711), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), PRK13605 (endoribonuclease SymE; Provisional), Phage_tail_S (pfam05069), W (PHA02516)