myRT

myRT report for GCA_000732615.1_ASM73261v1

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Seq: JPGL01000011.1 Burkholderia paludis strain MSh1 contigs11, whole genome shotgun sequence (229095 bp)
Overview 1 RT 1: 105702-112688 bp Neighborhood of RT #1 [105702, 112711] MFS_CitA M14_ASTE_ASPA-like RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 105702-107030 bp Ori: KFG97783.1 Feature: domain Description: MFS_CitA Location: 105759-106968 bp Feature: domain Description: MFS_CitA Location: 1 05759-1 06968 bp Feature: gene Location: 107112-108095 bp Ori: KFG97784.1 Feature: domain Description: M14_ASTE_ASPA-like Location: 107178-107799 bp Feature: domain Description: M1 4_ASTE_ASPA-like Location: 1 071 78-1 07799 bp Feature: gene Location: 109176-110525 bp Ori: KFG97785.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 109641-110277 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 09641 -1 1 0277 bp Feature: gene Location: 110855-111184 bp Ori: KFG97786.1 Feature: domain Description: Histone_HNS Location: 110876-111113 bp Feature: domain Description: Histone_HNS Location: 1 1 0876-1 1 1 1 1 3 bp Feature: gene Location: 111464-112711 bp Ori: KFG97787.1 Feature: domain Description: MFS_MucK Location: 111554-112688 bp Feature: domain Description: MFS_MucK Location: 1 1 1 554-1 1 2688 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_CitA (cd17368), M14_ASTE_ASPA-like (cd06910), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)

Seq: JPGL01000030.1 Burkholderia paludis strain MSh1 contigs30, whole genome shotgun sequence (110286 bp)
Overview 1 RT 1: 23409-26457 bp Neighborhood of RT #1 [23409, 26457] RVT-UG17 SLATT_5 Feature: gene Location: 23409-24824 bp Ori: KFG95528.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 23658-24270 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2 3658-2 42 70 bp Feature: gene Location: 25146-25670 bp Ori: KFG95529.1 Feature: domain Description: SLATT_5 Location: 25149-25632 bp Feature: domain Description: SLATT_5 Location: 2 5149-2 5632 bp Feature: gene Location: 25858-26457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)