myRT

myRT report for GCA_000732625.1_ASM73262v1

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Seq: JPJI01000008.1 Nonlabens ulvanivorans strain PLR contig_17, whole genome shotgun sequence (14236 bp)
Overview 1 RT 1: 118-5826 bp Neighborhood of RT #1 [118, 5828] DUF4375 RVT-UG12 Arm-DNA-bind_5 Dcm Dcm Feature: gene Location: 118-636 bp Ori: KEZ94452.1 Feature: domain Description: DUF4375 Location: 379-628 bp Feature: domain Description: DUF4375 Location: 379-628 bp Feature: gene Location: 801-2423 bp Ori: KEZ94453.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 1161-1611 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 1 1 61 -1 61 1 bp Feature: gene Location: 2648-3223 bp Feature: gene Location: 3621-5828 bp Ori: KEZ94455.1 Feature: domain Description: Arm-DNA-bind_5 Location: 3651-3849 bp Feature: domain Description: Arm-DNA-bind_5 Location: 3651 -3849 bp Feature: domain Description: Dcm Location: 3975-4428 bp Feature: domain Description: Dcm Location: 3975-4428 bp Feature: domain Description: Dcm Location: 5013-5826 bp Feature: domain Description: Dcm Location: 501 3-5826 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4375 (pfam14300), RVT-UG12, Arm-DNA-bind_5 (pfam17293), Dcm (COG0270)

Seq: JPJI01000026.1 Nonlabens ulvanivorans strain PLR contig_68, whole genome shotgun sequence (720589 bp)
Overview 1 RT 1: 179595-182917 bp Neighborhood of RT #1 [179595, 182917] UPRTase RVT-Retrons Feature: gene Location: 179595-180479 bp Ori: KEZ93518.1 Feature: domain Description: UPRTase Location: 180009-180219 bp Feature: domain Description: UPRTase Location: 180009-1802 19 bp Feature: gene Location: 180483-180797 bp Feature: gene Location: 180952-181986 bp Ori: KEZ93520.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 181186-181741 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 181186-181741 bp Feature: gene Location: 182412-182711 bp Feature: gene Location: 182711-182917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UPRTase (pfam14681), RVT-Retrons