myRT

myRT report for GCA_000733855.1_ASM73385v1

Download annotations/find similar RTs

Seq: JPOJ01000001.1 Methylomicrobium agile strain ATCC 35068 CC94DRAFT_scf7180000000008_quiver_quiver.1_C, whole genome shotgun sequence (4431305 bp)
Overview 1 RT 1: 2964269-2966859 bp 2 RT 2: 3947081-3953225 bp Neighborhood of RT #1 [2964269, 2966873] PHA02517 IS5 RVT-GII RT_G2_intron GIIM rve_2 Neighborhood of RT #2 [3947081, 3953278] rve RVT-GII outer_NodT PRK10614 Feature: gene Location: 2964269-2964418 bp Feature: domain Description: PHA02517 Location: 2964272-2964410 bp Feature: domain Description: PHA0251 7 Location: 2964272-296441 0 bp Feature: gene Location: 2964559-2965521 bp Feature: domain Description: IS5 Location: 2964757-2965516 bp Feature: domain Description: IS5 Location: 2964757-296551 6 bp Feature: gene Location: 2965545-2966255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2965674-2965740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2965674-2965740 bp Feature: domain Description: RT_G2_intron Location: 2965743-2966229 bp Feature: domain Description: RT_G2_intron Location: 2965743-2966229 bp Feature: gene Location: 2966314-2966679 bp Feature: domain Description: GIIM Note: maturase Location: 2966344-2966533 bp Feature: domain Description: GIIM Note: maturase Location: 2966344-2966533 bp Feature: gene Location: 2966712-2966873 bp Feature: domain Description: rve_2 Location: 2966715-2966859 bp Feature: domain Description: rve_2 Location: 296671 5-2966859 bp Feature: gene Location: 3947081-3947344 bp Feature: gene Location: 3947419-3948312 bp Feature: domain Description: rve Location: 3947818-3948172 bp Feature: domain Description: rve Location: 394781 8-39481 72 bp Feature: gene Location: 3948410-3948577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3948413-3948554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 394841 3-3948554 bp Feature: gene Location: 3948681-3950159 bp Feature: domain Description: outer_NodT Location: 3948720-3950076 bp Feature: domain Description: outer_NodT Location: 3948720-3950076 bp Feature: gene Location: 3950168-3953278 bp Feature: domain Description: PRK10614 Location: 3950180-3953225 bp Feature: domain Description: PRK1 061 4 Location: 39501 80-3953225 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), IS5 (COG3039), RVT-GII, RT_G2_intron (cd01651), GIIM (pfam08388), rve_2 (pfam13333), rve (pfam00665), outer_NodT (TIGR01845), PRK10614 (multidrug efflux system subunit MdtC; Provisional)