myRT

myRT report for GCA_000735445.1_GSMA_DRAFTv1

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Seq: JMPQ01000026.1 Serratia marcescens subsp. marcescens ATCC 13880 GSMA.assembly.29, whole genome shotgun sequence (176574 bp)
Overview 1 RT 1: 172519-174604 bp Neighborhood of RT #1 [172519, 174609] RVT-UG4 FimA PRK15287 Feature: gene Location: 172519-173262 bp Ori: KFD16119.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 172633-173080 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 72633-1 73080 bp Feature: gene Location: 173523-174047 bp Ori: KFD16120.1 Feature: domain Description: FimA Location: 173538-174045 bp Feature: domain Description: FimA Location: 1 73538-1 74045 bp Feature: gene Location: 174109-174609 bp Ori: KFD16121.1 Feature: domain Description: PRK15287 Location: 174163-174604 bp Feature: domain Description: PRK1 5287 Location: 1 741 63-1 74604 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, FimA (pfam16970), PRK15287 (fimbrial minor subunit StfF)

Seq: JMPQ01000018.1 Serratia marcescens subsp. marcescens ATCC 13880 GSMA.assembly.21, whole genome shotgun sequence (13559 bp)
Overview 1 RT 1: 9898-13135 bp Neighborhood of RT #1 [9898, 13135] PerC Avd_like RVT-DGRs Feature: gene Location: 9898-10149 bp Ori: KFD16604.1 Feature: domain Description: PerC Location: 10000-10138 bp Feature: domain Description: PerC Location: 10000-10138 bp Feature: gene Location: 10967-11353 bp Ori: KFD16605.1 Feature: domain Description: Avd_like Location: 10997-11327 bp Feature: domain Description: Avd_like Location: 10997-1132 7 bp Feature: gene Location: 11343-12614 bp Ori: KFD16606.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11535-12231 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11535-12 2 31 bp Feature: gene Location: 12974-13135 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PerC (pfam06069), Avd_like (cd16376), RVT-DGRs