myRT

myRT report for GCA_000735455.1_GYRE_DRAFTv1

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Seq: JMPS01000008.1 Yokenella regensburgei ATCC 49455 GYRE.assembly.009, whole genome shotgun sequence (148600 bp)
Overview 1 RT 1: 50232-55807 bp Neighborhood of RT #1 [50232, 55839] thiQ DedA RVT-Retrons PRK10572 PRK04123 Feature: gene Location: 50232-50933 bp Ori: KFD25407.1 Gene: thiQ Feature: domain Description: thiQ Location: 50235-50925 bp Feature: domain Description: thiQ Location: 50235-50925 bp Feature: gene Location: 50930-51697 bp Ori: KFD25408.1 Feature: domain Description: DedA Location: 50954-51542 bp Feature: domain Description: DedA Location: 50954-51 542 bp Feature: gene Location: 52052-52996 bp Ori: KFD25409.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52187-52739 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 521 87-52739 bp Feature: gene Location: 52977-53822 bp Ori: KFD25410.1 Feature: domain Description: PRK10572 Location: 52980-53820 bp Feature: domain Description: PRK1 0572 Location: 52980-53820 bp Feature: gene Location: 54148-55839 bp Ori: KFD25411.1 Gene: araB Feature: domain Description: PRK04123 Location: 54151-55807 bp Feature: domain Description: PRK041 23 Location: 541 51 -55807 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT thiQ (TIGR01277), DedA (COG0586), RVT-Retrons, PRK10572 (arabinose operon transcriptional regulator AraC), PRK04123 (ribulokinase; Provisional)

Seq: JMPS01000016.1 Yokenella regensburgei ATCC 49455 GYRE.assembly.017, whole genome shotgun sequence (61906 bp)
Overview 1 RT 1: 9502-15246 bp Neighborhood of RT #1 [9502, 15458] PRK10902 RfaL RVT-UG4 TcdB_toxin_midN Feature: gene Location: 9502-10539 bp Ori: KFD24792.1 Feature: domain Description: PRK10902 Location: 9859-10522 bp Feature: domain Description: PRK10902 Location: 9859-1052 2 bp Feature: gene Location: 10740-12188 bp Ori: KFD24793.1 Feature: domain Description: RfaL Location: 10869-11724 bp Feature: domain Description: RfaL Location: 10869-1172 4 bp Feature: gene Location: 12690-13847 bp Ori: KFD24794.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 13062-13500 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 13062 -13500 bp Feature: gene Location: 13673-14542 bp Feature: gene Location: 14631-15458 bp Ori: KFD24796.1 Feature: domain Description: TcdB_toxin_midN Location: 15102-15246 bp Feature: domain Description: TcdB_toxin_midN Location: 15102 -152 46 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10902 (FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional), RfaL (COG3307), RVT-UG4, TcdB_toxin_midN (pfam12256)